RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 UBTFL6P0CB48 400 aaPredicted RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 ERVK-10P10266 1014 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 CSE1LP55060 971 aaKnown RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 HIC1Q14526 733 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 EFHC1Q5JVL4 640 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 MORN1Q5T089 497 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 DDIASQ8IXT1 998 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 MTBPQ96DY7 904 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 IARS2Q9NSE4 1012 aaKnown RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 SLC17A7Q9P2U7 560 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 DNAJB4Q9UDY4 337 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 AFF4Q9UHB7 1163 aaKnown RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 DNAJC16Q9Y2G8 782 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 COQ4Q9Y3A0 265 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 TMEM191CA6NGB0 347 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 C9IYK1 514 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 POLBP06746 335 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 TNFRSF8P28908 595 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 OR1D2P34982 312 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 PLK1P53350 603 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 GJA9P57773 515 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 ITGA9Q13797 1035 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 PDK1Q15118 436 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 LRRC8DQ7L1W4 858 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 ZCCHC9Q8N567 271 aaKnown RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 ZNF75CPQ92670 426 aaPredicted RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 LRGUKQ96M69 825 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 TMEM209Q96SK2 561 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 LRRC4CQ9HCJ2 640 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 FBXO6Q9NRD1 293 aaPredicted RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 IPO11Q9UI26 975 aaKnown RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 GNEQ9Y223 722 aaKnown RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 LRCH4O75427 683 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 ZWINTO95229 277 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 CHRNA1P02708 482 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 GDF10P55107 478 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 SLC6A3Q01959 620 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 ZDHHC24Q6UX98 284 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 MAMDC4Q6UXC1 1216 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 CACUL1Q86Y37 369 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 SRPK1Q96SB4 655 aaKnown RBP12.39□□□□□ -0.43
CHPF2-201ENST00000035307 SCOCQ9UIL1 159 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 VANGL2Q9ULK5 521 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 SHOC2Q9UQ13 582 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 ANGPTL3Q9Y5C1 460 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 NRXN2Q9P2S2 1712 aa12.39□□□□□ -0.43
CHPF2-201ENST00000035307 TBX18O95935 607 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 CKMP06732 381 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 GOT1P17174 413 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 SERPINB5P36952 375 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 OGDHQ02218 1023 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 STILQ15468 1287 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 SLC26A11Q86WA9 606 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 TTC30AQ86WT1 665 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 STRA6Q9BX79 667 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 RNF103O00237 685 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 ZMPSTE24O75844 475 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 APOEP02649 317 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 NPR3P17342 541 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 TFE3P19532 575 aaPredicted RBP12.38□□□□□ -0.43
CHPF2-201ENST00000035307 SERPINB4P48594 390 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 COG7P83436 770 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 GBE1Q04446 702 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 STRA8Q7Z7C7 330 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 ZNF467Q7Z7K2 595 aaPredicted RBP12.38□□□□□ -0.43
CHPF2-201ENST00000035307 VCPIP1Q96JH7 1222 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 NDE1Q9NXR1 346 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 GJD2Q9UKL4 321 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 FAM237BA0A1B0GVD1 139 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 SIGLEC16A6NMB1 481 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 DNM1LO00429 736 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 TPST1O60507 370 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 CCDC22O60826 627 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 ITGB1P05556 798 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 PTGIRP43119 386 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 PITX1P78337 314 aaPredicted RBP12.38□□□□□ -0.43
CHPF2-201ENST00000035307 ZNF235Q14590 738 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 ITPRIPL1Q6GPH6 555 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 SPATA6LQ8N4H0 392 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 COLEC11Q9BWP8 271 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 TKTL2Q9H0I9 626 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 PLK2Q9NYY3 685 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 CDY1Q9Y6F8 540 aa12.38□□□□□ -0.43
CHPF2-201ENST00000035307 A0A1W2PQ45 241 aaPredicted RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 A0A1W2PQY0 241 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 APOC4-APOC2K7ER74 178 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 ATP5HO75947 161 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 APOC2P02655 101 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 LHX1P48742 406 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PEX5P50542 639 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 CDCA2Q69YH5 1023 aaPredicted RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 HFE2Q6ZVN8 426 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 MON1BQ7L1V2 547 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 OSTM1Q86WC4 334 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 BBS5Q8N3I7 341 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 GALNT4Q8N4A0 578 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 TTC39CQ8N584 583 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms