RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Hkdc1Q91W97 915 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pcdha1Q91Y21 948 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 4930550L24RikQ99PA7 320 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Rmi1Q9D4G9 616 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Rassf7Q9DD19 359 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ankfn1A0A140LIW7 1083 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pate1E9Q658 125 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Vmn1r39G3UWE6 305 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ercc2O08811 760 aaKnown RBP16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Il2P04351 169 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Enpp1P06802 906 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Sar1aP36536 198 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Epas1P97481 874 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Dnajc1Q61712 552 aaKnown RBP16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Rad54bQ6PFE3 886 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fnip2Q80TD3 1108 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ip6k2Q80V72 448 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Slc2a12Q8BFW9 622 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 KyQ8C8H8 661 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Atg14Q8CDJ3 492 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Spag16Q8K450 639 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Slc25a3Q8VEM8 357 aaKnown RBP16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Tas1r2Q925I4 843 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 PtprfA2A8L5 1898 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Zfp839E9PUU5 921 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Tnfrsf11bO08712 401 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Slc17a7Q3TXX4 560 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 DbhQ64237 622 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 DstykQ6XUX1 927 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Slco2b1Q8BXB6 683 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 ParvbQ9ES46 365 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Hes6Q9JHE6 224 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Sf3b1Q99NB9 1304 aaKnown RBP16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Baz2bA2AUY4 2123 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Itpripl1A2ASA8 547 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ccdc8D3YZV8 685 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ttc7bE9Q6P5 843 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pias1O88907 651 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Il12aP43431 215 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Bpifa6Q0VGU8 367 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pdss1Q33DR2 409 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pla2g4dQ50L43 825 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Zfp512bQ6PHP4 879 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fra10ac1Q8BP78 315 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Zfp263Q8CF60 680 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Slc36a1Q8K4D3 475 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fam151aQ8QZW3 608 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Zfp617Q91WM0 559 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Cog2Q921L5 731 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Usp11Q99K46 921 aa16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Bzw1Q9CQC6 419 aaKnown RBP16.34■□□□□ 0.21
Trim39-203ENSMUST00000113706 Sh3pxd2bA2AAY5 908 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Oaz2O08608 189 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Slc11a2P49282 568 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pecam1Q08481 727 aaKnown RBP16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fubp3Q3TIX6 575 aaKnown RBP16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Cyp2c66Q5GLZ0 490 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gcnt3Q5JCT0 437 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 MregQ6NVG5 214 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Spata7Q80VP2 582 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 1700001K19RikQ80ZT1 219 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 DrgxQ8BYH0 263 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Cabs1Q8C633 391 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Znf276Q8CE64 614 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Traf3ip2Q8N7N6 555 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Eml3Q8VC03 897 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pip4k2cQ91XU3 421 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Nudt8Q9CR24 210 aa16.33■□□□□ 0.21
Trim39-203ENSMUST00000113706 Igkv5-45A0A0B4J1J1 115 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Zfp212G3X8R7 492 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 FaahO08914 579 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Atxn1lP0C7T6 687 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Alkbh5Q3TSG4 395 aaKnown RBP16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ccdc33Q3ULW6 985 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ripor1Q68FE6 1223 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 CcnyQ8BGU5 341 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Slc7a4Q8BLQ7 635 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Stx16Q8BVI5 326 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 CtbsQ8R242 366 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ssu72Q9CY97 194 aaKnown RBP16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Tsga13Q9DA17 273 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Erap1Q9EQH2 930 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 NbnQ9R207 751 aa16.33■□□□□ 0.2
Trim39-203ENSMUST00000113706 Akap17bA2A3V1 959 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 GzmgP13366 248 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 YwhagP61982 247 aaKnown RBP16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Sycp3P70281 254 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 HmgcrQ01237 887 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 GstcdQ5RL51 634 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Crhr2Q60748 411 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rasa4Q6PFQ7 802 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Ube2q1Q7TSS2 422 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Mettl21cQ8BLU2 248 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Amz1Q8BVF9 502 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Sec63Q8VHE0 760 aaKnown RBP16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Galk1Q9R0N0 392 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Rgsl1H3BL40 1073 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 ChkaO54804 453 aa16.32■□□□□ 0.2
Trim39-203ENSMUST00000113706 Cdh9P70407 786 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 372 ms