RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm36028A0A0U1RPM1 299 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Gm16430A6X8J1 155 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Arhgap42B2RQE8 841 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Ppp1r36D3Z0R2 411 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Maml3D4QGC2 1135 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Vmn2r100E9QAZ9 850 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Akap1O08715 857 aaKnown RBP23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 mt-Co3P00416 261 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 PrlP06879 226 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Zfy2P20662 777 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Upp1P52624 311 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Dbx1P52950 335 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Arl4aP61213 200 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Slc5a10Q5SWY8 596 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Vtcn1Q7TSP5 283 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Q8CDN1 933 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Hectd2Q8CDU6 774 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Lims2Q91XD2 341 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 TrabdQ99JY4 376 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Kif12Q9D2Z8 642 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Pus10Q9D3U0 527 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Slxl1Q9D515 155 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 SgshQ9EQ08 502 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Smok2bQ9QYZ3 484 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Smok2aQ9QYZ6 504 aa23.4■■□□□ 1.34
Scn1b-201ENSMUST00000098548 Igkv5-43A0A0B4J1J2 115 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Rhox3cA2AWM0 215 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Rhox3hL7MU37 215 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Kifc3O35231 824 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 YwhaqP68254 245 aaKnown RBP23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Rhox3aQ4TU90 215 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Znf598Q80YR4 908 aaKnown RBP23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Fam177a1Q8BR63 207 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Ctxn3Q8BXZ0 80 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Fam118bQ8C569 351 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Spata16Q8C636 571 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Pde10aQ8CA95 790 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Taf10Q8K0H5 218 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Traf3ip2Q8N7N6 555 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Tti1Q91V83 1085 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Rnf112Q96DY5 654 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 MlxiplQ99MZ3 864 aa23.39■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Fam155bA2BDP1 471 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Gm10719E9Q7T3 227 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Olfr1022L7MTT3 315 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 AmhP27106 555 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 PkdccQ5RJI4 492 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Gngt1Q61012 74 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 DbhQ64237 622 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Rxfp1Q6R6I7 758 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Fbxo32Q9CPU7 355 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Trmt11Q9CWH5 460 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Thg1lQ9CY52 298 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Dcaf6Q9DC22 876 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 PignQ9R1S3 931 aa23.38■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Kcng1A2BDX4 514 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Daw1D3Z7A5 415 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Ccdc144bE9PVZ3 520 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 TankP70347 448 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Atp13a5Q3TYU2 1216 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Slc38a5Q3U1J0 479 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Mylk3Q3UIZ8 795 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Ifnl2Q4VK74 193 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Best2Q8BGM5 508 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Taf5Q8C092 801 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Taf12Q8VE65 161 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Eif3hQ91WK2 352 aaKnown RBP23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 FdpsQ920E5 353 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Sntg2Q925E0 539 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Cyp4f13Q99N19 523 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Dcp2Q9CYC6 422 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Rfc5Q9D0F6 339 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Slc22a17Q9D9E0 401 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Sgf29Q9DA08 293 aaKnown RBP23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Dpysl5Q9EQF6 564 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Ppp2r3cQ9JK24 453 aa23.37■■□□□ 1.33
Scn1b-201ENSMUST00000098548 A930018M24RikB7ZMY3 218 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 C7D3YXF5 845 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Zfp94E9Q6Y4 486 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Serpinb6dQ3UWK8 375 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 HrQ61645 1182 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Myo6Q64331 1265 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Enoph1Q8BGB7 257 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 PigxQ99LV7 254 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 EcsitQ9QZH6 435 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Adamts5Q9R001 930 aa23.36■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Ect2lA0A140LIP2 953 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Gm10722F6VLK5 217 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Kcnk16G5E845 292 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Gm3336J3QMQ6 198 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Gm16427J3QN52 483 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Nek2O35942 443 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Vav1P27870 845 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Kif5cP28738 956 aaKnown RBP23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 FynP39688 537 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Cyp2c65Q148B1 490 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Cyb5r4Q3TDX8 528 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 CblbQ3TTA7 982 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Pld5Q3UNN8 536 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Rasa4Q6PFQ7 802 aa23.35■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms