RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Gm3002E9PW72 216 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Gm3468E9QAJ8 216 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Gm8108K7N734 216 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Gm3739L7N296 216 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Gm3164L7N2B9 238 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Gm3488M0QW81 238 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Htr3aP23979 487 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Mapre3Q6PER3 281 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Naif1Q6PFD7 327 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Mrfap1Q9CQL7 125 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Irx5Q9JKQ4 484 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Coro1cQ9WUM4 474 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Pld1Q9Z280 1074 aa15.09■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Gm21149A0A0G2JFY7 255 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Pax3P24610 479 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 SykP48025 629 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Ptpn5P54830 541 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 PtpaP58389 323 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Neurl1bQ0MW30 546 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Znf112Q0VAW7 879 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Klra3Q64329 266 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 RadilQ69Z89 1099 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Ints6Q6PCM2 883 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Gpatch2lQ6PE65 482 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 HpseQ6YGZ1 535 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Mis18bp1Q80WQ8 998 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Gm9758Q80ZT2 255 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Prkag3Q8BGM7 489 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Mettl3Q8C3P7 580 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Rmnd5bQ91YQ7 393 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Mxra8Q9DBV4 442 aa15.08■□□□□ 0.01
Pcdh20-201ENSMUST00000061628 Shank2Q80Z38 1476 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Reps1O54916 795 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Ets2P15037 468 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Fam131bQ3TY60 332 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Syce2Q505B8 171 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Fam149b1Q6NSV7 578 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Rps6ka6Q7TPS0 764 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Ddhd1Q80YA3 547 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Q8BGC1 442 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Vmp1Q99KU0 406 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Pdpk1Q9Z2A0 559 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Gm11983V9GXS8 105 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Smok3aC0HKC8 504 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Smok3bC0HKC9 504 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Klhl33G3UW92 533 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 OmdO35103 423 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 AvilO88398 819 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Hsd17b7O88736 334 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 TnfP06804 235 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Trim67Q505D9 768 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Lrrc47Q505F5 581 aaKnown RBP15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Scaf8Q6DID3 1268 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Q6GQV0 436 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Parp6Q6P6P7 630 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Plppr4Q7TME0 766 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Rpp40Q8R1F9 363 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 MyocdQ8VIM5 935 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Klhl35Q9CZ49 574 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Drg2Q9QXB9 364 aaKnown RBP15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Fut8Q9WTS2 575 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 MrasO08989 208 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Npr3P70180 536 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Sephs2P97364 452 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Ptcd3Q14C51 685 aaKnown RBP15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 BC030870Q3V2G4 71 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Gm5431Q5NCB3 844 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Cyp3a11Q64459 504 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Grik4Q8BMF5 956 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Fam126bQ8C729 530 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Mab21L3Q8CI17 429 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Crtc3Q91X84 619 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Mrto4Q9D0I8 239 aaKnown RBP15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Borcs6Q9D6W8 360 aa15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Celf2Q9Z0H4 508 aaKnown RBP15.08■□□□□ 0
Pcdh20-201ENSMUST00000061628 Tap1P21958 724 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Prox1P48437 737 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 9930111J21Rik1Q5SVP0 844 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Tgoln2Q62314 363 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Krt42Q6IFX2 452 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Stk40Q7TNL3 435 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Olfr474Q8VFC9 310 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Fam192aQ91WE2 254 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Fam111aQ9D2L9 613 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Ropn1Q9ESG2 212 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Vmn2r31L7N1Z4 861 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 TecP24604 630 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 DselQ0VBN2 1207 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Ak8Q32M07 479 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Spon2Q8BMS2 330 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Aldh4a1Q8CHT0 562 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Capn10Q9ESK3 666 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Copg2Q9QXK3 871 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Olfm1O88998 485 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Slc1a2P43006 572 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Aldh2P47738 519 aaKnown RBP15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Tekt4Q149S1 447 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Sp8Q8BMJ8 486 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Klhl12Q8BZM0 568 aa15.07■□□□□ 0
Pcdh20-201ENSMUST00000061628 Pdk3Q922H2 415 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 139.1 ms