RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Xkr4Q5GH67 647 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mief2Q5NCS9 454 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Vps72Q62481 368 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Scube3Q66PY1 993 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Fam102aQ78T81 392 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Prl3a1Q78Y73 227 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Stk40Q7TNL3 435 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Gpr139Q80UC8 345 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Slc36a3Q811P0 477 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Rfx6Q8C7R7 927 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Kcnc4Q8R1C0 628 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Nudcd3Q8R1N4 363 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Ap3m2Q8R2R9 418 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 CarfQ8VHI4 689 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 GcshQ91WK5 170 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mtif2Q91YJ5 727 aaKnown RBP7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Pacsin3Q99JB8 424 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Kdelr1Q99JH8 212 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Fuca1Q99LJ1 452 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 SncaipQ99ME3 962 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 GsdmcQ99NB5 468 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Med21Q9CQ39 144 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 PirQ9D711 290 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Dkc1Q9ESX5 509 aaKnown RBP7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Nr1h3Q9Z0Y9 445 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f15A0A087WR44 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f12A0A0A0MQP3 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Vmn2r121A2BE32 847 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f9A2BFZ7 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f7A2BHG6 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f19A2CG71 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f10A2CG92 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f3A2CGC2 496 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f13B8JKF6 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Gm3371F7CQW8 167 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Gm20503G3UZK1 150 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f2J3QMS5 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f25J3QMV9 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f6J3QMW9 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f26J3QNK2 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f24J3QNQ5 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Spin2fJ3QPU0 254 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f8J3QQ50 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f17L7MU81 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f18L7MU83 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 EsrraO08580 422 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 ChkaO54804 453 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Pgk1P09411 417 aaKnown RBP7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Gsta4P24472 222 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 GsrP47791 500 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Il1rapl1P59823 695 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Olfm3P63056 478 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Nsun2Q1HFZ0 757 aaKnown RBP7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f14Q1LZI5 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Alkbh5Q3TSG4 395 aaKnown RBP7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Znf746Q3U133 652 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Q3UE31 404 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Nlrc4Q3UP24 1024 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Pacs2Q3V3Q7 862 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Btbd35f27Q5FWA1 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 IqceQ6PCQ0 778 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Scaf4Q6PFF0 1209 aaKnown RBP7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 DstykQ6XUX1 927 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Psd4Q8BLR5 1005 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Dync1li1Q8R1Q8 523 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Tbc1d13Q8R3D1 400 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 MiosQ8VE19 875 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 BsndQ8VIM4 307 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Lypd3Q91YK8 363 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 GMCL1P1Q99N64 498 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Pcyox1Q9CQF9 505 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Atp6v1g1Q9CR51 118 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Ddx56Q9D0R4 546 aaKnown RBP7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Tssk3Q9D2E1 268 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Fam90a1bQ9D4F3 419 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Tmbim4Q9DA39 238 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 GmprQ9DCZ1 345 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 PyglQ9ET01 850 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 NumbQ9QZS3 653 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Dnajc12Q9R022 198 aa7.36□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Sf3b1Q99NB9 1304 aaKnown RBP7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Tnfrsf14A0A1W2P7D5 276 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Rnf19bA2A7Q9 732 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Fibcd1A2AV25 459 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup10A2BIN1 180 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup14A2CEK7 180 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup19A9C497 187 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup15A9R9W0 180 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup17B5X0G2 180 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Ptchd4B9EKX1 904 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup8E9PVW0 235 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Gm4302E9PX25 294 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup7E9QA79 235 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Zbtb11G5E8B9 1050 aaKnown RBP7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Vmn2r39L7N2E5 861 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup6P02762 180 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Cd2P08920 344 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Myl4P09541 193 aaKnown RBP7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup1P11588 180 aa7.35□□□□□ -1.23
Clrn1-202ENSMUST00000055636 Mup2P11589 180 aa7.35□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms