RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Osbpl6Q8BXR9 959 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 4932414N04RikQ8CEQ9 752 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rbmx2Q8R0F5 326 aaKnown RBP10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Atpaf2Q91YY4 289 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PmpcbQ9CXT8 489 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 AenQ9CZI9 336 aaKnown RBP10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Lama4P97927 1816 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm21083A0A0G2JFD5 256 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ttll6A4Q9E8 822 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sec22bO08547 215 aaKnown RBP10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cyp2j6O54750 501 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pnpla5Q32LZ8 432 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tex24Q5DP50 351 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slitrk1Q810C1 696 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dupd1Q8BK84 215 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Vps50Q8CI71 964 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Snx9Q91VH2 595 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Crtc3Q91X84 619 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Senp2Q91ZX6 588 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fzd9Q9R216 592 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Myh4Q5SX39 1939 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pcdh7A0A0A6YY83 1255 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Zc3h7aE9PWW6 970 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 GlrbP48168 496 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc11a2P49282 568 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 B3gat3P58158 335 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rplp2P99027 115 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 SPINDOCQ05AH6 381 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Esyt3Q5DTI8 891 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Lrrc15Q80X72 579 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Brat1Q8C3R1 822 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Olfr393Q8VGR6 312 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Oas1dQ8VI95 361 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cstf3Q99LI7 717 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tbx20Q9ES03 445 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ddx39bQ9Z1N5 428 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ces1bD3Z5G7 567 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm8298J3QPI0 401 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc2a4P14142 509 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Hspa1bP17879 642 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Csn1s1P19228 313 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cyp2f2P33267 491 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sipa1P46062 1037 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Hsd17b4P51660 735 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 RalgdsQ03385 852 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kcnk9Q3LS21 402 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Alkbh5Q3TSG4 395 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nlrp9cQ66X01 1004 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc45a1Q8BIV7 751 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ccdc63Q8CDV6 558 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rpp40Q8R1F9 363 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Lpgat1Q91YX5 370 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Prpf19Q99KP6 504 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cul2Q9D4H8 745 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fam166bA2AIP0 273 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Chrna9G3X8Z7 479 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Olfr743L7N1Y2 311 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 SarsP26638 512 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ogfod1Q3U0K8 545 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 MyrflQ3UN70 904 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kcna5Q61762 602 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dmc1Q61880 340 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Zdhhc24Q6IR37 284 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gpr141Q7TQP0 305 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Spata20Q80YT5 790 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 ChfrQ810L3 664 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ifi44Q8BV66 422 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Swi5Q8K3D3 89 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Vps11Q91W86 941 aaKnown RBP10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kdelr1Q99JH8 212 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Atp5dQ9D3D9 168 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fam227bQ9D518 532 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mgea5Q9EQQ9 916 aa10.15□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ptp4a2O70274 167 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Marcksl1P28667 200 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Shox2P70390 331 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Smyd1P97443 490 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Apoa1Q00623 264 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pcnx4Q3UVY5 1174 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 CybbQ61093 570 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tnfaip2Q61333 691 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Prrg3Q6PAQ9 231 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Snx17Q8BVL3 470 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Anapc2Q8BZQ7 837 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Map1sQ8C052 973 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Wdr47Q8CGF6 920 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Dnm1lQ8K1M6 742 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gdap2Q9DBL2 498 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 PllpQ9DCU2 182 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Znfx1Q8R151 1909 aaKnown RBP10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Olfr292F8VQ84 308 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Impdh2P24547 514 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gabrb2P63137 512 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Slc9b2Q5BKR2 547 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Foxo6Q70KY4 559 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Otub1Q7TQI3 271 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rbbp8Q80YR6 893 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Man2a2Q8BRK9 1152 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Dennd1aQ8K382 1016 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Sh3kbp1Q8R550 709 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms