RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 SiaeP70665 541 aa20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gbp1Q01514 589 aa20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Mcm9Q2KHI9 1134 aa20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Snx9Q91VH2 595 aa20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Pqbp1Q91VJ5 263 aaKnown RBP20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Tas1r2Q925I4 843 aa20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Usp11Q99K46 921 aa20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Fgfr1op2Q9CRA9 253 aa20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Rmdn1Q9DCV4 305 aa20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Ripk3Q9QZL0 486 aa20.74■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Itpripl1A2ASA8 547 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Tnfrsf11bO08712 401 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 PigrO70570 771 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Il3P01586 166 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Brcc3P46737 291 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Emilin3P59900 758 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Pik3r6Q3U6Q4 756 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Tmem237Q3V0J1 427 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Grid1Q61627 1009 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Prrt3Q6PE13 971 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Mis18bp1Q80WQ8 998 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Fam78aQ8C552 283 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Trim68Q8K243 485 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Fcho1Q8K285 873 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Sdcbp2Q99JZ0 292 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 CitP49025 2055 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gml2G5E8L7 176 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Psma2P49722 234 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 TankP70347 448 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Ankmy2Q3TPE9 440 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Slc17a7Q3TXX4 560 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Sp140Q6NSQ5 534 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Arhgef18Q6P9R4 1021 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Adam39Q7M762 756 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Iars2Q8BIJ6 1012 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Pak5Q8C015 719 aa20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 NonoQ99K48 473 aaKnown RBP20.73■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Klhl41A2AUC9 606 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Ccdc144bE9PVZ3 520 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Lrrc10bG3XA50 292 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 CcnoP0C242 352 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 PorP37040 678 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 B3gat3P58158 335 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Prkaa1Q5EG47 559 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Rxfp1Q6R6I7 758 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gprc5aQ8BHL4 356 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Bag2Q91YN9 210 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Q9D4A5 307 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gsdmdc1Q9D8T2 487 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Serpina1fQ9DCQ7 411 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Iqcj-Schip1A0A088MLT8 559 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 ChkaO54804 453 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Schip1P0DPB4 484 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Rfx2P48379 717 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Epas1P97481 874 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Ndrg1Q62433 394 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Cyp2c29Q64458 490 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Zfp449Q8CB76 518 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Fam192aQ91WE2 254 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 AticQ9CWJ9 592 aaKnown RBP20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 ParvbQ9ES46 365 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Plscr1Q9JJ00 328 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 PnkpQ9JLV6 522 aaKnown RBP20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Bmp15Q9Z0L4 392 aa20.72■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Sh3pxd2bA2AAY5 908 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gm5160F8VPN3 147 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 VdrP48281 422 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Cdo1P60334 200 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 MylpfP97457 169 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Pdss1Q33DR2 409 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Pyroxd1Q3TMV7 498 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Atp4aQ64436 1033 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Tmem209Q8BRG8 561 aaKnown RBP20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Prrg2Q8R182 198 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Tmco1Q921L3 188 aaKnown RBP20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Nudt8Q9CR24 210 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Chmp2aQ9DB34 222 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Slc8a3S4R2P9 928 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gm5485A0A1D5RM98 91 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Cyp2t4E9PWV0 503 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Slc10a3P21129 473 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 PgfP49764 158 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gsdmc2Q2KHK6 480 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gsdmc4Q3TR54 480 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gcnt3Q5JCT0 437 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Ccdc154Q6RUT8 657 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Baiap2l2Q80Y61 522 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Ttc39bQ8BYY4 617 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Wdr59Q8C0M0 992 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gsdmc3Q8CB12 480 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Lrrc66Q8K0B3 872 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 TraipQ8VIG6 470 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Tlr6Q9EPW9 795 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gm29554A0A087WNW4 188 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gm8369E9PZI3 166 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Gm3739L7N296 216 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 P01652 108 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Atp9bP98195 1146 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Itga3Q62470 1053 aa20.71■□□□□ 0.91
Ctdsp1-201ENSMUST00000027367 Mettl21cQ8BLU2 248 aa20.71■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms