RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Ephx4Q6IE26 359 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tyw3Q8BSA9 257 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Clic5Q8BXK9 251 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Msi2Q920Q6 346 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Prmt7Q922X9 692 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ppil6Q9D6D8 278 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 PgdQ9DCD0 483 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Aldh1a3Q9JHW9 512 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Adgra3Q7TT36 1310 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zscan4-ps3A0A1B0GRH6 506 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zscan4-ps2A0A1C7CYU6 506 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Vwa5b1A9Z1V5 1215 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Morc3F7BJB9 942 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zc3h7bF8VPP8 982 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mkln1O89050 735 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 PrlP06879 226 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Eno3P21550 434 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 CblP22682 913 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Teddm2Q208S0 260 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gm5431Q5NCB3 844 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Magee1Q6PCZ4 918 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Bend6Q6PFX2 281 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Acsm2Q8K0L3 575 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Pde2aQ922S4 916 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Oas1cQ924S2 362 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Eif2b2Q99LD9 351 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Prl2a1Q9JHK0 228 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Scnn1bQ9WU38 638 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 PygmQ9WUB3 842 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Exoc7O35250 697 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 KitP05532 979 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ly9Q01965 654 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Otud5Q3U2S4 566 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rbm44Q3V089 1013 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Esyt3Q5DTI8 891 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Adam2Q60718 735 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mxd4Q60948 209 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 CtcfQ61164 736 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Dclk2Q6PGN3 756 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 SgtaQ8BJU0 315 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Dmtf1Q8CE22 761 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 OscarQ8VBT3 265 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Znf622Q91VY9 476 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mrpl4Q9DCU6 294 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ngly1Q9JI78 651 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tlr4Q9QUK6 835 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Katna1Q9WV86 491 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 RttnQ8R4Y8 2226 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Olfr1123A2AT85 323 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Reps1O54916 795 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 AcadlP51174 430 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zfp868Q3UTQ6 422 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Znf507Q6ZPY5 941 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ckap4Q8BMK4 575 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tspan8Q8R3G9 235 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Smg8Q8VE18 991 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Trex1Q91XB0 314 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tex44Q9DA60 530 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ttll9A2APC3 461 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ccdc85cE9Q6B2 420 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rgsl1H3BL40 1073 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Pik3cdO35904 1043 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zbtb7aO88939 569 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Cdc25bP30306 576 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Usp46P62069 366 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Eml4Q3UMY5 988 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Fam107aQ78TU8 144 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rasgrp4Q8BTM9 673 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rdh12Q8BYK4 316 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Lacc1Q8BZT9 430 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gsdmc3Q8CB12 480 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Vmn1r213Q8R278 384 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Alas1Q8VC19 642 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Nsmce3Q9CPR8 279 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ifi30Q9ESY9 248 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 GabrqQ9JLF1 638 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gm7682A0A0J9YUM1 481 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gm11985A0A1B0GS61 206 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mindy4b-psA0A1W2P7H6 457 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup10A2BIN1 180 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup14A2CEK7 180 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup19A9C497 187 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup15A9R9W0 180 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup17B5X0G2 180 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Slc4a9E9PUP3 929 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup8E9PVW0 235 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup7E9QA79 235 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup6P02762 180 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup1P11588 180 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mup2P11589 180 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 MlxipQ2VPU4 917 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Nat9Q3UG98 241 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Brd9Q3UQU0 596 aaKnown RBP4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Trim50Q810I2 483 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Fbxo9Q8BK06 437 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tubgcp5Q8BKN5 1024 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Slc13a3Q91Y63 600 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 GmfbQ9CQI3 142 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Trim13Q9CYB0 407 aa4.66□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ampd2Q9DBT5 798 aa4.66□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms