RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 RalbQ9JIW9 206 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Rfwd2Q9R1A8 733 aaKnown RBP12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Sned1Q70E20 1403 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gm20721E9Q2U8 318 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Mup13L7N222 235 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Stt3bQ3TDQ1 823 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Bpifb5Q3UQ05 490 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Wdr18Q4VBE8 431 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Traf3Q60803 567 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tas2r102Q7M717 329 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Pcdhgb1Q91XX8 918 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Spg21Q9CQC8 308 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 IkbipQ9DBZ1 373 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Hic1Q9R1Y5 733 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Epm2aQ9WUA5 330 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Erich1E9PY43 332 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gm10801F7C7Q0 168 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Glb1P23780 647 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 BtkP35991 659 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Hspa8P63017 646 aaKnown RBP12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Col6a2Q02788 1034 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Mtnr1aQ61184 353 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Taf5Q8C092 801 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 PygbQ8CI94 843 aaKnown RBP12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Cog2Q921L5 731 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 BniplQ99JU7 328 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Lysmd3Q99LE3 305 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tex9Q9D845 387 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Cyp2g1Q9WV19 494 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Scn7aB1AYL1 1681 aa12.34□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Grip2G3XA20 1042 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Rgs4O08899 205 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Lamp2P17047 415 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 PuraP42669 321 aaKnown RBP12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 MlipQ5FW52 269 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Itih1Q61702 907 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Zswim9Q6DI92 447 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Olfr867Q7TRF3 331 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Rimbp2Q80U40 1072 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 ChfrQ810L3 664 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 CenpuQ8C4M7 410 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Amer2Q8CCJ4 672 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Rnf219Q8K2Y0 722 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tmem82Q8R115 356 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Vmn1r206Q8R277 312 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ppa2Q91VM9 330 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Foxp3Q99JB6 429 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Dok4Q99KE3 325 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Mrpl57Q9CQF8 102 aaKnown RBP12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Exoc2Q9D4H1 924 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Il21rQ9JHX3 529 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Nup50Q9JIH2 466 aaKnown RBP12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ripk3Q9QZL0 486 aa12.33□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Apba1B2RUJ5 842 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Cyp2t4E9PWV0 503 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Atp6v1b2P62814 511 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Zfp560Q3URI6 754 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 1810049J17RikQ3V2G9 153 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Shroom1Q5SX79 823 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Grid1Q61627 1009 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Dnajc1Q61712 552 aaKnown RBP12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 P3h2Q8CG71 703 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Dedd2Q8QZV0 330 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Pcdhb18Q91Y02 792 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ppp2r2dQ925E7 453 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ppp1r2Q9DCL8 206 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Arhgef10Q8C033 1345 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ccl26F8VQM2 93 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Olfr611K7N609 323 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Olfr612L7N462 323 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Hoxc6P10629 235 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Aars2Q14CH7 980 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Colec11Q3SXB8 272 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Znf354cQ571J5 560 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Rassf6Q80UQ2 353 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Smoc1Q8BLY1 463 aaKnown RBP12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ndufs1Q91VD9 727 aaKnown RBP12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Akr1a1Q9JII6 325 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 PygmQ9WUB3 842 aaKnown RBP12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Dlg5E9Q9R9 1921 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Cacna1sQ02789 1880 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Foxm1O08696 760 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Pcbp1P60335 356 aaKnown RBP12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Oas1fQ14AZ4 364 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Trmt1Q3TX08 663 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Zmym5Q3U2E2 627 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Fam83fQ3UKU4 495 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gm29609Q3UU56 907 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Cd37Q61470 281 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 GpamQ61586 827 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gtf3c2Q8BL74 907 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Slc9a4Q8BUE1 797 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Dnali1Q8BVN8 258 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Efl1Q8C0D5 1127 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 OoepQ9CWE6 164 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ndufaf1Q9CWX2 328 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Cul3Q9JLV5 768 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ruvbl2Q9WTM5 463 aaKnown RBP12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Slc26a3Q9WVC8 757 aa12.33□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Thsd7aQ69ZU6 1645 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms