RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Tlk1Q8C0V0 766 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 CopaQ8CIE6 1224 aaKnown RBP19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Hdhd5Q91WM2 419 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Arl2Q9D0J4 184 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Trim42Q9D2H5 723 aa19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 HnrnpcQ9Z204 313 aaKnown RBP19.24■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Col11a1Q61245 1804 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ccdc175E9PVB3 822 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Nedd9O35177 833 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cyp2a4P15392 494 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Zfy2P20662 777 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cyp2a5P20852 494 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 IppP28575 584 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Mpzl3Q3V3F6 237 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Fbxo39Q5NBU5 443 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Zfp943Q6NZP4 507 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 MafaQ8CF90 359 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Slco4a1Q8K078 723 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ctu1Q99J10 420 aa19.23■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Iqcj-Schip1A0A088MLT8 559 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Zmynd8A2A484 1235 aaKnown RBP19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ttll8A4Q9F1 832 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Vmn2r100E9QAZ9 850 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Schip1P0DPB4 484 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 LdlrP35951 862 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Gpsm3Q3U1Z5 159 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Efr3bQ6ZQ18 817 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ireb2Q811J3 963 aaKnown RBP19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Slc17a6Q8BLE7 582 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Scara3Q8C850 606 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Clptm1Q8VBZ3 664 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Gm8909G3UXE9 396 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 ChrngP04760 519 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Dnmt3cP0DOY1 709 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 CtswP56203 371 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cyth2P63034 400 aaKnown RBP19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Bop1P97452 732 aaKnown RBP19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Asprv1Q09PK2 339 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Rbm20Q3UQS8 1199 aaKnown RBP19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Proser1Q5PRE5 913 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Grik4Q8BMF5 956 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Snx15Q91WE1 337 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Fubp1Q91WJ8 651 aaKnown RBP19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Dclre1aQ9JIC3 1026 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Map3k14Q9WUL6 942 aa19.22■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 ChgbP16014 677 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Il12aP43431 215 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Pex2P55098 305 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Abce1P61222 599 aaKnown RBP19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 SiaeP70665 541 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 4930430A15RikQ05AC5 485 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Krt26Q3TRJ4 462 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Olfm4Q3UZZ4 505 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Mks1Q5SW45 561 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ahcyl1Q80SW1 530 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Pcmtd2Q8BHD8 359 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Sulf1Q8K007 870 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Caap1Q8VDY9 356 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 FtcdQ91XD4 541 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cog2Q921L5 731 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Traf7Q922B6 594 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 LactbQ9EP89 551 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Tdp2Q9JJX7 370 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Adgra2Q91ZV8 1336 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Gm10720D3Z1I5 223 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cyp2f2P33267 491 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Crhr1P35347 415 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Fen1P39749 378 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Cdo1P60334 200 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Dact3Q0PHV7 610 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ccdc127Q3TC33 260 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Pyroxd1Q3TMV7 498 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Prmt6Q6NZB1 378 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Stk40Q7TNL3 435 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 ClmnQ8C5W0 1052 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Celf3Q8CIN6 465 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Glis2Q8VDL9 521 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Afg3l1Q920A7 789 aaKnown RBP19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Ttc30a1Q99J38 664 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 RalbQ9JIW9 206 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Trpm5Q9JJH7 1158 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Sf3b1Q99NB9 1304 aaKnown RBP19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Tmem131O70472 1877 aa19.21■□□□□ 0.67
Shkbp1-201ENSMUST00000003857 Fam81bA0A140LI28 432 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Klc2O88448 599 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Cbx2P30658 519 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Dsc2P55292 902 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 ADGRF3Q58Y75 991 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Cyp3a13Q64464 503 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Clec4b1Q7TS58 209 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Xylt1Q811B1 953 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Mrps18aQ99N85 196 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Lrrc71Q9D3W5 558 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tmem86aQ9D8N3 241 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 C1qtnf1Q9QXP7 281 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Myo16Q5DU14 1919 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fibcd1A2AV25 459 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 C1qbpO35658 278 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Trdmt1O55055 415 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Vps45P97390 570 aa19.2■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms