RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 R3hdm2Q80TM6 1044 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 AopepQ8BXQ6 817 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cog2Q921L5 731 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Borcs5Q9D920 195 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ror1Q9Z139 937 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pdpk1Q9Z2A0 559 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lgr4A2ARI4 951 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Smok3aC0HKC8 504 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Smok3bC0HKC9 504 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slc1a6O35544 561 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 PigrO70570 771 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nlrc4Q3UP24 1024 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nr0b1Q61066 472 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Zcchc2Q69ZB8 1166 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mettl21cQ8BLU2 248 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Zfp57Q8C6P8 421 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Kct2Q8K201 259 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Zdhhc12Q8VC90 267 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Dapk2Q8VDF3 370 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Usp26Q99MX1 835 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 PlekQ9JHK5 350 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cdc42ep4Q9JM96 349 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Olfr600E9PUN7 314 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cdh19E9Q3A7 770 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ctnnd2O35927 1247 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 PrkcdP28867 674 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Smyd1P97443 490 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rnf113a2Q14B01 337 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 StilQ60988 1262 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Dhx33Q80VY9 698 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slitrk3Q810B9 980 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rbm22Q8BHS3 420 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tbl3Q8C4J7 801 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Epn2Q8CHU3 595 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Efcab1Q9D3N2 212 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Eef1akmt2Q9D853 244 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Hes6Q9JHE6 224 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tuba8Q9JJZ2 449 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pnpla7A2AJ88 1352 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 MtrA6H5Y3 1253 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Stra6O70491 670 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cma1P21844 247 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 DselQ0VBN2 1207 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Clhc1Q5M6W3 596 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam149b1Q6NSV7 578 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Klhl5Q6PFE1 708 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Reep1Q8BGH4 201 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lrrc24Q8BHA1 521 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 GmppbQ8BTZ7 360 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Senp7Q8BUH8 1037 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Catsper4Q8BVN3 442 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Dact1Q8R4A3 778 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Trub2Q91WG3 331 aaKnown RBP9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pcdhga4Q91XY4 930 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 CalcbQ99MP3 130 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Use1Q9CQ56 270 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Entpd5Q9WUZ9 427 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 4921501E09RikA0A0R4J054 908 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 AV320801A2AWL3 467 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Grik3B1AS29 919 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm15023L7MUB4 467 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 MttpO08601 894 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pik3r2O08908 722 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Phkg1P07934 388 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ppm1aP49443 382 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 YwhazP63101 245 aaKnown RBP9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Irx2P81066 474 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tars2Q3UQ84 723 aaKnown RBP9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Syn2Q64332 586 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rapgefl1Q68EF8 662 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Spata20Q80YT5 790 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 SvopQ8BFT9 548 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tab1Q8CF89 502 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Bdh2Q8JZV9 245 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fndc5Q8K4Z2 209 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sbk1Q8QZX0 417 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 DgkgQ91WG7 788 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 DeraQ91YP3 318 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gprc5bQ923Z0 410 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ndufa5Q9CPP6 116 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fis1Q9CQ92 152 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ddi1Q9DAF3 408 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sv2aQ9JIS5 742 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Hs6st1Q9QYK5 411 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm7086A0A1W2P766 342 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Guca2bO09051 106 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Kif1cO35071 1100 aaKnown RBP9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 LtfP08071 707 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 MylpfP97457 169 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 P3h1Q3V1T4 739 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Parp6Q6P6P7 630 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 C1qtnf7Q8BVD7 289 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Atp6v1hQ8BVE3 483 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Plcl2Q8K394 1128 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Colec12Q8K4Q8 742 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mcfd2Q8K5B2 145 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 RnpepQ8VCT3 650 aaKnown RBP9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Yaf2Q99LW6 179 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nme5Q99MH5 211 aa9.35□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ddx28Q9CWT6 540 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms