RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 NTAN1Q96AB6 310 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 SLC9A7Q96T83 725 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 TRPV6Q9H1D0 765 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 PIH1D1Q9NWS0 290 aaKnown RBP18.43■□□□□ 0.54
PHGDH-226ENST00000641756 FBXW11Q9UKB1 542 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 MYO18AQ92614 2054 aaKnown RBP18.42■□□□□ 0.54
PHGDH-226ENST00000641756 B4GALT3O60512 393 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 MT-ND3P03897 115 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 TPI1P60174 286 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 PDK1Q15118 436 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 ZNF598Q86UK7 904 aaKnown RBP18.42■□□□□ 0.54
PHGDH-226ENST00000641756 PDCD7Q8N8D1 485 aaKnown RBP18.42■□□□□ 0.54
PHGDH-226ENST00000641756 SERAC1Q96JX3 654 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 PKMYT1Q99640 499 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 COLEC11Q9BWP8 271 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 KDM4CQ9H3R0 1056 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 SMYD2Q9NRG4 433 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 ABCF3Q9NUQ8 709 aa18.42■□□□□ 0.54
PHGDH-226ENST00000641756 ADRA1DP25100 572 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 GLUD2P49448 558 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 SEMA3BQ13214 749 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 BSPRYQ5W0U4 402 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 RTN4RL1Q86UN2 441 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 BANPQ8N9N5 519 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 SCAMP5Q8TAC9 235 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 TCP10LQ8TDR4 215 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 PITPNM3Q9BZ71 974 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 PRDM16Q9HAZ2 1276 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 SSU72Q9NP77 194 aaKnown RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 DMAP1Q9NPF5 467 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 SLC17A7Q9P2U7 560 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 PPP1R12AO14974 1030 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 UGT1A9O60656 530 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 STK10O94804 968 aaKnown RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 SUN1O94901 812 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 ZWINTO95229 277 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 APOEP02649 317 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 CKBP12277 381 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 PSMB4P28070 264 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 FDFT1P37268 417 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 WASHC5Q12768 1159 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 SCAPQ12770 1279 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 MTFR1Q15390 333 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 LACTB2Q53H82 288 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 TRMT10BQ6PF06 316 aaKnown RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 TRPM8Q7Z2W7 1104 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 TAC4Q86UU9 113 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 ZNF567Q8N184 647 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 LRRC39Q96DD0 335 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 PGAP3Q96FM1 320 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 THOC1Q96FV9 657 aaKnown RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 HHIPL1Q96JK4 782 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 EBNA1BP2Q99848 306 aaKnown RBP18.41■□□□□ 0.54
PHGDH-226ENST00000641756 TKTL2Q9H0I9 626 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 WDCPQ9H6R7 721 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 UGT1A7Q9HAW7 530 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 UGT1A10Q9HAW8 530 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 UGT1A8Q9HAW9 530 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 SLCO1B3Q9NPD5 702 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 DSEQ9UL01 958 aa18.41■□□□□ 0.54
PHGDH-226ENST00000641756 SF3B1O75533 1304 aaKnown RBP eCLIP18.41■□□□□ 0.543e-6■■■■■ 100.2
PHGDH-226ENST00000641756 WDR91A4D1P6 747 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 H0YHG0 523 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 KCNK1O00180 336 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 SKIP12755 728 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 SCTRP47872 440 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 AIF1P55008 147 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 SEPT7Q16181 437 aaKnown RBP18.4■□□□□ 0.54
PHGDH-226ENST00000641756 PDK4Q16654 411 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 ARL13BQ3SXY8 428 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 DCLRE1AQ6PJP8 1040 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 SLC26A11Q86WA9 606 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 ZNF280BQ86YH2 543 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 THEM5Q8N1Q8 247 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 NPWQ8N729 165 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 CD99L2Q8TCZ2 262 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 SUSD3Q96L08 255 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 UROC1Q96N76 676 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 ACTR5Q9H9F9 607 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-226ENST00000641756 XAB2Q9HCS7 855 aaKnown RBP18.4■□□□□ 0.54
PHGDH-226ENST00000641756 SRRDQ9UH36 339 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 OPHN1O60890 802 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 DDHD2O94830 711 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 OR4Q2P0C623 313 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 PRKCHP24723 683 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 CRADDP78560 199 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 MBTPS1Q14703 1052 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 PM20D1Q6GTS8 502 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 LRRC6Q86X45 466 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 LRRC8CQ8TDW0 803 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 DEPDC1BQ8WUY9 529 aa18.4■□□□□ 0.54
PHGDH-226ENST00000641756 WDR27A2RRH5 827 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 TRDMT1O14717 391 aaKnown RBP18.39■□□□□ 0.53
PHGDH-226ENST00000641756 CABYRO75952 493 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 CSH1P0DML2 217 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 CSH2P0DML3 217 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 PYGBP11216 843 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 TSPY1Q01534 308 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 NOGQ13253 232 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 FAM133BQ5BKY9 247 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms