RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HAPLN1P10915 354 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 HTR7P34969 479 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 SERPINB6P35237 376 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 NRLP54845 237 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 TUBB8Q3ZCM7 444 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 UBAP2Q5T6F2 1119 aaKnown RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 ANKRD22Q5VYY1 191 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 SLC8B1Q6J4K2 584 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 NECAB2Q7Z6G3 386 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 RNF168Q8IYW5 571 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 ZBED8Q8IZ13 594 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 ARFGAP2Q8N6H7 521 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 TTC9BQ8N6N2 239 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 UHMK1Q8TAS1 419 aaKnown RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 CASP10Q92851 521 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 ZNF689Q96CS4 500 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 CEP295NLQ96MC4 621 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 SEPT5Q99719 369 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 MTRRQ9UBK8 725 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 MFHAS1Q9Y4C4 1052 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 BACE2Q9Y5Z0 518 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 GOLGA8MH3BSY2 632 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 RGS16O15492 202 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 TCEA3O75764 348 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 IVLP07476 585 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 GLUD2P49448 558 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 PDIA2Q13087 525 aaKnown RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 KCNJ11Q14654 390 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 SPOUT1Q5T280 376 aaKnown RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 KIAA1841Q6NSI8 718 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 MSANTD2Q6P1R3 559 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 PRSS55Q6UWB4 352 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-216ENST00000641375 KDM7AQ6ZMT4 941 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 VPS52Q8N1B4 723 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 SERPINB12Q96P63 405 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 CLIC5Q9NZA1 410 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 SFMBT1Q9UHJ3 866 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 SLC27A5Q9Y2P5 690 aa16.96■□□□□ 0.31
PHGDH-216ENST00000641375 A0A087WUV0 522 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 TLDC2A0PJX2 215 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 E7ESA3 106 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 KIAA0355O15063 1070 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 TMEM63AO94886 807 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 HSPA8P11142 646 aaKnown RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 SLC2A3P11169 496 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 RAG1P15918 1043 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 EPHB2P29323 1055 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 USP46P62068 366 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 STAT4Q14765 748 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 PRKD1Q15139 912 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 PSMD5Q16401 504 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 ZSCAN26Q16670 478 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 MFSD5Q6N075 450 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 TMEM199Q8N511 208 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 TAB3Q8N5C8 712 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 FBXO32Q969P5 355 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 BRD8Q9H0E9 1235 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 PRDM5Q9NQX1 630 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 TLR8Q9NR97 1041 aaKnown RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 OLA1Q9NTK5 396 aaKnown RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 NOVA2Q9UNW9 492 aaKnown RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 COL4A6Q14031 1691 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 CLGNO14967 610 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 LRIG2O94898 1065 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 CSF2RAP15509 400 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 MAGEA6P43360 314 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 PGFP49763 221 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 SKOR1P84550 965 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 AP1B1Q10567 949 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 DUSP4Q13115 394 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 ARHGEF18Q6ZSZ5 1173 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 CCDC110Q8TBZ0 833 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 EPS8L3Q8TE67 593 aaKnown RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 ZNF558Q96NG5 402 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 LGMNQ99538 433 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 OSER1Q9NX31 292 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 TLR6Q9Y2C9 796 aa16.95■□□□□ 0.3
PHGDH-216ENST00000641375 KIAA0100Q14667 2235 aaKnown RBP16.95■□□□□ 0.3
PHGDH-216ENST00000641375 TCRBV7S3A2A0A539 114 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 VNN2O95498 520 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 AGTP01019 485 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 MX2P20592 715 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 LMAN1P49257 510 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 DNAJC5GQ8N7S2 189 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 CCNYQ8ND76 341 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 STKLD1Q8NE28 680 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 PYROXD1Q8WU10 500 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 TLCD1Q96CP7 247 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 TMEM169Q96HH4 297 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 MYCBPQ99417 103 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-216ENST00000641375 CRISPLD1Q9H336 500 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 PRDM12Q9H4Q4 367 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 LRRC4CQ9HCJ2 640 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 GMIPQ9P107 970 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 A0A0A0MRY4 1105 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 WDR27A2RRH5 827 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 TRIM43BA6NCK2 446 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 SMIM23A6NLE4 172 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 SOD2P04179 222 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 ITGB8P26012 769 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms