RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 LHX5Q9H2C1 402 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 IL21RQ9HBE5 538 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 CNGB3Q9NQW8 809 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 ABCC13Q9NSE7 274 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 EIF2B4Q9UI10 523 aaKnown RBP17.41■□□□□ 0.38
PHGDH-213ENST00000641272 MAN1B1Q9UKM7 699 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.41■□□□□ 0.38
PHGDH-213ENST00000641272 CTNND2Q9UQB3 1225 aa17.41■□□□□ 0.38
PHGDH-213ENST00000641272 RNF225M0QZC1 329 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-213ENST00000641272 TBL1XO60907 577 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 PABPC1P11940 636 aaKnown RBP17.4■□□□□ 0.38
PHGDH-213ENST00000641272 SLC6A4P31645 630 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 STIM1Q13586 685 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 LCLAT1Q6UWP7 414 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 LAYNQ6UX15 382 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 RRAGAQ7L523 313 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 METTL3Q86U44 580 aaKnown RBP17.4■□□□□ 0.38
PHGDH-213ENST00000641272 OR2T3Q8NH03 318 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 SPATA20Q8TB22 786 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 WFIKKN2Q8TEU8 576 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 KCTD13Q8WZ19 329 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 TMA16Q96EY4 203 aaKnown RBP17.4■□□□□ 0.38
PHGDH-213ENST00000641272 PRICKLE1Q96MT3 831 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-213ENST00000641272 MIS12Q9H081 205 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 MTG2Q9H4K7 406 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 STIM2Q9P246 746 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 NEUROG3Q9Y4Z2 214 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 ASPMQ8IZT6 3477 aa17.4■□□□□ 0.38
PHGDH-213ENST00000641272 CHD6Q8TD26 2715 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 LTFP02788 710 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 PAEPP09466 180 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 CD70P32970 193 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 ZNF132P52740 706 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 FAM133BQ5BKY9 247 aaKnown RBP17.39■□□□□ 0.37
PHGDH-213ENST00000641272 ADGRF1Q5T601 910 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 MBLAC2Q68D91 279 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 MSANTD2Q6P1R3 559 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 ADIPOR2Q86V24 386 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 AHI1Q8N157 1196 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 DNASE2BQ8WZ79 361 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 MYEOVQ96EZ4 313 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 C6orf106Q9H6K1 298 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-213ENST00000641272 FNDC3AQ9Y2H6 1198 aaKnown RBP17.39■□□□□ 0.37
PHGDH-213ENST00000641272 PLXNA2O75051 1894 aa17.39■□□□□ 0.37
PHGDH-213ENST00000641272 A0A1B0GVT2 93 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 BIN1O00499 593 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 LATS1O95835 1130 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 MOCS2O96007 188 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-213ENST00000641272 OXTRP30559 389 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 ACSL1P33121 698 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 NUMBP49757 651 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 TBX4P57082 545 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 BNC1Q01954 994 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 CAMK2GQ13555 558 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-213ENST00000641272 PTPRNQ16849 979 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.38■□□□□ 0.37
PHGDH-213ENST00000641272 PNPLA1Q8N8W4 532 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 KDF1Q8NAX2 398 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-213ENST00000641272 ADAM32Q8TC27 787 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 NELFBQ8WX92 580 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 CEP63Q96MT8 703 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 TMEM245Q9H330 911 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 METTL14Q9HCE5 456 aaKnown RBP17.38■□□□□ 0.37
PHGDH-213ENST00000641272 STOML2Q9UJZ1 356 aa17.38■□□□□ 0.37
PHGDH-213ENST00000641272 METTL12A8MUP2 240 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 BCAT2O15382 392 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-213ENST00000641272 IGLV3-19P01714 112 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 IGLV3-27P01718 113 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 FTH1P19P0C7X4 201 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 STX17P56962 302 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 ZNF445P59923 1031 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 TRIP6Q15654 476 aaKnown RBP17.37■□□□□ 0.37
PHGDH-213ENST00000641272 PIK3R6Q5UE93 754 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 NADSYN1Q6IA69 706 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 TTI2Q6NXR4 508 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 MFN1Q8IWA4 741 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 CADM4Q8NFZ8 388 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 DQX1Q8TE96 717 aaKnown RBP17.37■□□□□ 0.37
PHGDH-213ENST00000641272 SLC35F5Q8WV83 523 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 GOLGA1Q92805 767 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 FAM149B1Q96BN6 582 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 NUP58Q9BVL2 599 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 GAREM1Q9H706 876 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 ST7Q9NRC1 585 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 MSRB2Q9Y3D2 182 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 PCDHB9Q9Y5E1 797 aa17.37■□□□□ 0.37
PHGDH-213ENST00000641272 TMEM8BA6NDV4 472 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 ACSL4O60488 711 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 BMP6P22004 513 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 MATKP42679 507 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 SLC11A2P49281 568 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 RPS14P62263 151 aaKnown RBP17.36■□□□□ 0.37
PHGDH-213ENST00000641272 RPS24P62847 133 aaKnown RBP17.36■□□□□ 0.37
PHGDH-213ENST00000641272 E2F5Q15329 346 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 CNGA2Q16280 664 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 NUGGCQ68CJ6 796 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 SCML4Q8N228 414 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 CARNMT1Q8N4J0 409 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 HJURPQ8NCD3 748 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-213ENST00000641272 LMO3Q8TAP4 145 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms