RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 CPQQ9Y646 472 aa20.52■□□□□ 0.88
PHGDH-210ENST00000641115 TCRBV7S2A1N4TA0A589 114 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 DAPK3O43293 454 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 STC2O76061 302 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 IRF1P10914 325 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 IL4RP24394 825 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 KCNQ1P51787 676 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 DYNLT1P63172 113 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 SLC7A9P82251 487 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 ANKRD54Q6NXT1 300 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 BBS12Q6ZW61 710 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 C1orf74Q96LT6 269 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 TASP1Q9H6P5 420 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 GKN1Q9NS71 199 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 RBM12Q9NTZ6 932 aaKnown RBP20.51■□□□□ 0.87
PHGDH-210ENST00000641115 XPO7Q9UIA9 1087 aaKnown RBP20.51■□□□□ 0.87
PHGDH-210ENST00000641115 MRPS23Q9Y3D9 190 aaKnown RBP20.51■□□□□ 0.87
PHGDH-210ENST00000641115 HS3ST4Q9Y661 456 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 MTCH2Q9Y6C9 303 aa20.51■□□□□ 0.87
PHGDH-210ENST00000641115 FAM72CH0Y354 149 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 MOSPD3O75425 235 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 HOXB8P17481 243 aaPredicted RBP20.5■□□□□ 0.87
PHGDH-210ENST00000641115 CORO1AP31146 461 aaKnown RBP20.5■□□□□ 0.87
PHGDH-210ENST00000641115 HTR7P34969 479 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 AVPR1AP37288 418 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 GGCXP38435 758 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 SLC11A2P49281 568 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 ADCY2Q08462 1091 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 FAM72AQ5TYM5 149 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 FAM72DQ6L9T8 149 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 RFX8Q6ZV50 586 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 FAM72BQ86X60 149 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 SLC46A2Q9BY10 475 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 PRDM16Q9HAZ2 1276 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 STIM2Q9P246 746 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 SNX10Q9Y5X0 201 aa20.5■□□□□ 0.87
PHGDH-210ENST00000641115 SOX1O00570 391 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 NRG2O14511 850 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 APOL1O14791 398 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 LRIG2O94898 1065 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 ZFXP17010 805 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 IGFBP4P22692 258 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 HCAR3P49019 387 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 MLLT6P55198 1093 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 NRG1Q02297 640 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 ADAM15Q13444 863 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 MS4A13Q5J8X5 152 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 PIK3R6Q5UE93 754 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 GPR149Q86SP6 731 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 CMTM8Q8IZV2 173 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 TTC13Q8NBP0 860 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 PCDH19Q8TAB3 1148 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 ZFRQ96KR1 1074 aaKnown RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 APOL5Q9BWW9 433 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 HOMER3Q9NSC5 361 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 POU3F3P20264 500 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 EPHB2P29323 1055 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 SIX1Q15475 284 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 SLC9A4Q6AI14 798 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 LRRC31Q6UY01 552 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 DENND1CQ8IV53 801 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 LRRN4CLQ8ND94 238 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 AZIN2Q96A70 460 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 GAS2L1Q99501 681 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 DCLK3Q9C098 648 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 ARHGEF4Q9NR80 690 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 LSM7Q9UK45 103 aaKnown RBP20.49■□□□□ 0.87
PHGDH-210ENST00000641115 NR2E1Q9Y466 385 aa20.49■□□□□ 0.87
PHGDH-210ENST00000641115 NUP210Q8TEM1 1887 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-210ENST00000641115 EFCAB8A8MWE9 144 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 E9PAM4 449 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 ACSL4O60488 711 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 CEBPBP17676 345 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 TGM2P21980 687 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 DPYSQ14117 519 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 RAP1GAP2Q684P5 730 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 RWDD4Q6NW29 188 aaKnown RBP20.48■□□□□ 0.87
PHGDH-210ENST00000641115 SYCE2Q6PIF2 218 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 CHSY1Q86X52 802 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 DDX42Q86XP3 938 aaKnown RBP eCLIP20.48■□□□□ 0.873e-6■■■□□ 16.1
PHGDH-210ENST00000641115 ZDHHC14Q8IZN3 488 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 PQLC3Q8N755 202 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 PRELID2Q8N945 189 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 ING5Q8WYH8 240 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 TBC1D31Q96DN5 1066 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 ARHGAP26Q9UNA1 814 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 SH3BP1Q9Y3L3 701 aa20.48■□□□□ 0.87
PHGDH-210ENST00000641115 TRIOBPQ9H2D6 2365 aa20.47■□□□□ 0.87
PHGDH-210ENST00000641115 PRRC2BQ5JSZ5 2229 aaKnown RBP20.47■□□□□ 0.87
PHGDH-210ENST00000641115 APOC4-APOC2K7ER74 178 aa20.47■□□□□ 0.87
PHGDH-210ENST00000641115 FGF10O15520 208 aaPredicted RBP20.47■□□□□ 0.87
PHGDH-210ENST00000641115 PHF2O75151 1096 aa20.47■□□□□ 0.87
PHGDH-210ENST00000641115 LATS1O95835 1130 aa20.47■□□□□ 0.87
PHGDH-210ENST00000641115 APOC2P02655 101 aa20.47■□□□□ 0.87
PHGDH-210ENST00000641115 AMPD1P23109 780 aa20.47■□□□□ 0.87
PHGDH-210ENST00000641115 TUBB4BP68371 445 aa20.47■□□□□ 0.87
PHGDH-210ENST00000641115 AUHQ13825 339 aaKnown RBP20.47■□□□□ 0.87
PHGDH-210ENST00000641115 ADGRE1Q14246 886 aa20.47■□□□□ 0.87
PHGDH-210ENST00000641115 MANEALQ5VSG8 457 aa20.47■□□□□ 0.87
PHGDH-210ENST00000641115 CES5AQ6NT32 575 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms