RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 ITGA11Q9UKX5 1188 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 NFICP08651 508 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 GCLCP48506 637 aaPredicted RBP20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 KRT77Q7Z794 578 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 SERAC1Q96JX3 654 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 PIH1D1Q9NWS0 290 aaKnown RBP20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 ANKRD6Q9Y2G4 727 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 CLOCKO15516 846 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 ASNA1O43681 348 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 SOX10P56693 466 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 SNX30Q5VWJ9 437 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 TMC3Q7Z5M5 1100 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 HOMEZQ8IX15 550 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 KLHL31Q9H511 634 aa20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 MRPL39Q9NYK5 338 aaKnown RBP20.18■□□□□ 0.82
KCNMA1-293ENST00000640969 CENPXA8MT69 81 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 MSH3P20585 1137 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 CRABP2P29373 138 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 MARC1Q5VT66 337 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 ZNF57Q68EA5 555 aaPredicted RBP20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 RIBC2Q9H4K1 309 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 MRASO14807 208 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 HUNKP57058 714 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 SFSWAPQ12872 951 aaKnown RBP20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 C16orf72Q14CZ0 275 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 SV2AQ7L0J3 742 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 ARHGEF19Q8IW93 802 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 ZCCHC7Q8N3Z6 543 aaKnown RBP20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 LRRC39Q96DD0 335 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 APOL4Q9BPW4 351 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 DCUN1D5Q9BTE7 237 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 RAD51BO15315 384 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 LDLRP01130 860 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 LAMTOR4Q0VGL1 99 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 MAPK11Q15759 364 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 CBWD3Q5JTY5 395 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 CBWD5Q5RIA9 395 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 EDEM1Q92611 657 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 A1CFQ9NQ94 594 aaKnown RBP20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 CASTOR2A6NHX0 329 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 TBC1D12O60347 775 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 CELF2O95319 508 aaKnown RBP20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 LTFP02788 710 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 PIK3R1P27986 724 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 KLHL1Q9NR64 748 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 LIMD1Q9UGP4 676 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 A0A087WZ62 844 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 TNFAIP8O95379 198 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 NOS3P29474 1203 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 CLVS1Q8IUQ0 354 aaPredicted RBP20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 C4orf19Q8IY42 314 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 POU5F2Q8N7G0 328 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 AGBL3Q8NEM8 1001 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 MTMR8Q96EF0 704 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 ZFRQ96KR1 1074 aaKnown RBP20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 RNF145Q96MT1 663 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 ANKRD27Q96NW4 1050 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 FDXACB1Q9BRP7 624 aaPredicted RBP20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 NMRAL1Q9HBL8 299 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 CYLDQ9NQC7 956 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 CNGB3Q9NQW8 809 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 DDX43Q9NXZ2 648 aaKnown RBP20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 RABGEF1Q9UJ41 708 aa20.17■□□□□ 0.82
KCNMA1-293ENST00000640969 GRK4P32298 578 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 KPNA1P52294 538 aaPredicted RBP20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 RBM43Q6ZSC3 357 aaKnown RBP20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 ARMC7Q9H6L4 198 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 TSPAN16Q9UKR8 245 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 IFRD1O00458 451 aaPredicted RBP20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 KPNA4O00629 521 aaPredicted RBP20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 SEC22BO75396 215 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 PRKAA2P54646 552 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 LRRC74BQ6ZQY2 392 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 HTR3CQ8WXA8 447 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 CCDC3Q9BQI4 270 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 PAIP1Q9H074 479 aaKnown RBP20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 FAM205AQ6ZU69 1335 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 SMIM31A0A1B0GVY4 71 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 MED26O95402 600 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 FGFR2P21802 821 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 CCR1P32246 355 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 EPHB3P54753 998 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 SREBF2Q12772 1141 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 FBXO47Q5MNV8 452 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 CYP2R1Q6VVX0 501 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 MACC1Q6ZN28 852 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 NFKBIZQ9BYH8 718 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 TLR8Q9NR97 1041 aaKnown RBP20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 DDX18Q9NVP1 670 aaKnown RBP20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 AHSPQ9NZD4 102 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 MYRFQ9Y2G1 1151 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 MROH7Q68CQ1 1323 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 ZNF844Q08AG5 666 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 TSNQ15631 228 aaKnown RBP20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 PHACTR1Q9C0D0 580 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 FANCEQ9HB96 536 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 STARD13Q9Y3M8 1113 aa20.16■□□□□ 0.82
KCNMA1-293ENST00000640969 ZSCAN5CA6NGD5 496 aaPredicted RBP20.15■□□□□ 0.82
KCNMA1-293ENST00000640969 URODP06132 367 aa20.15■□□□□ 0.82
KCNMA1-293ENST00000640969 CNPP09543 421 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms