RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ALDOAP04075 364 aaKnown RBP15.03■□□□□ -0
SCARB2-221ENST00000640341 VAV1P15498 845 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 TSHRP16473 764 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 ATICP31939 592 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 MSX2P35548 267 aaPredicted RBP15.03■□□□□ -0
SCARB2-221ENST00000640341 AP2B1P63010 937 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 SARNPP82979 210 aaKnown RBP15.03■□□□□ -0
SCARB2-221ENST00000640341 ZNF483Q8TF39 744 aaPredicted RBP15.03■□□□□ -0
SCARB2-221ENST00000640341 TFB1MQ8WVM0 346 aaKnown RBP15.03■□□□□ -0
SCARB2-221ENST00000640341 KHSRPQ92945 711 aaKnown RBP eCLIP15.03■□□□□ -0
SCARB2-221ENST00000640341 ANGPTL2Q9UKU9 493 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 C2CD2Q9Y426 696 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 DCXO43602 365 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 LGALS2P05162 132 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 DLG2Q15700 870 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 TEX44Q53QW1 395 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 LPCAT4Q643R3 524 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 SLC9A4Q6AI14 798 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 CXorf38Q8TB03 319 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 SYBUQ9NX95 663 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 NME7Q9Y5B8 376 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 PCDHA11Q9Y5I1 949 aa15.03■□□□□ -0
SCARB2-221ENST00000640341 CAPN14A8MX76 684 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 RNF103O00237 685 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 MFSD11O43934 449 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 CYP2C8P10632 490 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 ACAT1P24752 427 aaKnown RBP15.02■□□□□ -0
SCARB2-221ENST00000640341 CUL3Q13618 768 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 SLC2A14Q8TDB8 520 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 TMEM216Q9P0N5 145 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 CLGNO14967 610 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 TM7SF2O76062 418 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 STK10O94804 968 aaKnown RBP15.02■□□□□ -0
SCARB2-221ENST00000640341 CRHR1P34998 444 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 SULT1E1P49888 294 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 ASPHQ12797 758 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 STILQ15468 1287 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 CATSPER4Q7RTX7 472 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 EXOC8Q8IYI6 725 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.02■□□□□ -0
SCARB2-221ENST00000640341 ZNF670Q9BS34 389 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 EIF2AQ9BY44 585 aaKnown RBP15.02■□□□□ -0
SCARB2-221ENST00000640341 ZNF180Q9UJW8 692 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 TRIP11Q15643 1979 aa15.02■□□□□ -0
SCARB2-221ENST00000640341 FAM159BA6NKW6 160 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 CLDN5O00501 218 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 SPDYAQ5MJ70 313 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 IRGCQ6NXR0 463 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 PACS1Q6VY07 963 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 RAPH1Q70E73 1250 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 ZNF778Q96MU6 729 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 ANKRD27Q96NW4 1050 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 GBP5Q96PP8 586 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 ZCWPW1Q9H0M4 648 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 KLHL8Q9P2G9 620 aaPredicted RBP15.02□□□□□ -0.01
SCARB2-221ENST00000640341 ITGA11Q9UKX5 1188 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 SOX13Q9UN79 622 aa15.02□□□□□ -0.01
SCARB2-221ENST00000640341 SDR42E2A6NKP2 422 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 KLF11O14901 512 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 DGKIO75912 1065 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 TPH1P17752 444 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 ADCYAP1R1P41586 468 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 RASIP1Q5U651 963 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 CTU1Q7Z7A3 348 aaKnown RBP15.01□□□□□ -0.01
SCARB2-221ENST00000640341 DEFB107AQ8IZN7 70 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 DEFB106AQ8N104 65 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 OR52K1Q8NGK4 314 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 ZNF669Q96BR6 464 aaPredicted RBP15.01□□□□□ -0.01
SCARB2-221ENST00000640341 PNPLA8Q9NP80 782 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 PAPOLBQ9NRJ5 636 aaKnown RBP15.01□□□□□ -0.01
SCARB2-221ENST00000640341 CACNG4Q9UBN1 327 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 LIN7AO14910 233 aaPredicted RBP15.01□□□□□ -0.01
SCARB2-221ENST00000640341 TSPAN1O60635 241 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 OPHN1O60890 802 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 ITGA2BP08514 1039 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 NCBP2-AS2Q69YL0 99 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 RNF148Q8N7C7 305 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 SLC35F5Q8WV83 523 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 P2RY11Q96G91 374 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 FGD4Q96M96 766 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 CCDC106Q9BWC9 280 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 GPRC5DQ9NZD1 345 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 ADCY6O43306 1168 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 SIN3BO75182 1162 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 SERPINA6P08185 405 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 COPAP53621 1224 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 DSG1Q02413 1049 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 DNAL1Q4LDG9 190 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 SLC30A9Q6PML9 568 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 ATG14Q6ZNE5 492 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 HPS6Q86YV9 775 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 FAM136AQ96C01 138 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 AGAP2Q99490 1192 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 OSMRQ99650 979 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 NXF3Q9H4D5 531 aaKnown RBP15.01□□□□□ -0.01
SCARB2-221ENST00000640341 SETD4Q9NVD3 440 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 RBPJLQ9UBG7 517 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 ZNF212Q9UDV6 495 aa15.01□□□□□ -0.01
SCARB2-221ENST00000640341 RPL26L1Q9UNX3 145 aaKnown RBP15.01□□□□□ -0.01
SCARB2-221ENST00000640341 DDNO94850 711 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms