RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 FBXO4Q9UKT5 387 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 RIF1Q5UIP0 2472 aaKnown RBP22.6■■□□□ 1.21
SCN1B-206ENST00000638536 GPR179Q6PRD1 2367 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 TCRBV5S1A1TA0A578 114 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 DDX3XO00571 662 aaKnown RBP eCLIP22.6■■□□□ 1.21
SCN1B-206ENST00000638536 PLEKP08567 350 aaPredicted RBP22.6■■□□□ 1.21
SCN1B-206ENST00000638536 CASP14P31944 242 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 KLHL30Q0D2K2 578 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 MPPE1Q53F39 396 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 C10orf76Q5T2E6 689 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 ACAD10Q6JQN1 1059 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 TMPRSS4Q9NRS4 437 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 R4GN57 208 aa22.6■■□□□ 1.21
SCN1B-206ENST00000638536 ITIH6Q6UXX5 1313 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 CYBBP04839 570 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 GBP1P32455 592 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 GGCXP38435 758 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 TNFRSF4P43489 277 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 RPS24P62847 133 aaKnown RBP22.59■■□□□ 1.21
SCN1B-206ENST00000638536 ZBED6P86452 979 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 SH3PXD2AQ5TCZ1 1133 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 RAP1GAP2Q684P5 730 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 BNIPLQ7Z465 357 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 MCOLN2Q8IZK6 566 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 CFAP52Q8N1V2 620 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 ALLCQ8N6M5 410 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 IL17RCQ8NAC3 791 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 PIEZO1Q92508 2521 aa22.59■■□□□ 1.21
SCN1B-206ENST00000638536 TBL1XO60907 577 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 ADCY5O95622 1261 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 APOEP02649 317 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 HNRNPLP14866 589 aaKnown RBP eCLIP22.58■■□□□ 1.21
SCN1B-206ENST00000638536 CCR1P32246 355 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 PXNP49023 591 aaPredicted RBP22.58■■□□□ 1.21
SCN1B-206ENST00000638536 SLC25A52Q3SY17 297 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 MS4A13Q5J8X5 152 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 TMEM215Q68D42 235 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 RXFP2Q8WXD0 754 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 NELL1Q92832 810 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 RNF34Q969K3 372 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 BTN2A3PQ96KV6 586 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 ACOX2Q99424 681 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 PRMT1Q99873 361 aaKnown RBP22.58■■□□□ 1.21
SCN1B-206ENST00000638536 STIM2Q9P246 746 aa22.58■■□□□ 1.21
SCN1B-206ENST00000638536 RFC1P35251 1148 aaPredicted RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 CXCR3P49682 368 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 GSCP56915 257 aaPredicted RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 C15orf59Q2T9L4 293 aaPredicted RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 CCDC14Q49A88 953 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 EGFLAMQ63HQ2 1017 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 RNF43Q68DV7 783 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 ARCQ7LC44 396 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 TXNDC5Q8NBS9 432 aaKnown RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 PGAP3Q96FM1 320 aaPredicted RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 STAP1Q9ULZ2 295 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 SLC27A6Q9Y2P4 619 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 LUC7L2Q9Y383 392 aaKnown RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 SNX10Q9Y5X0 201 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 C2CD4BA6NLJ0 364 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 SGK1O00141 431 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 CBFA2T2O43439 604 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 ADAM23O75077 832 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 PAPSS2O95340 614 aaPredicted RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 KLF8O95600 359 aaPredicted RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 TACR2P21452 398 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 RRM1P23921 792 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 HLA-FP30511 346 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 ATP11AP98196 1134 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 C1QBPQ07021 282 aaKnown RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 PPP2R5DQ14738 602 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 ZNF528Q3MIS6 628 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 HEATR6Q6AI08 1181 aaKnown RBP22.57■■□□□ 1.2
SCN1B-206ENST00000638536 SYT13Q7L8C5 426 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 VSTM4Q8IW00 320 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 LGI2Q8N0V4 545 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 ATP6V0D2Q8N8Y2 350 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 HHIPQ96QV1 700 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 STARD13Q9Y3M8 1113 aa22.57■■□□□ 1.2
SCN1B-206ENST00000638536 ATMINO43313 823 aaPredicted RBP22.56■■□□□ 1.2
SCN1B-206ENST00000638536 CALB1P05937 261 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 KRT3P12035 628 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 WASP42768 502 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 RPL7AP62424 266 aaKnown RBP22.56■■□□□ 1.2
SCN1B-206ENST00000638536 MRPS21P82921 87 aaKnown RBP22.56■■□□□ 1.2
SCN1B-206ENST00000638536 DEUP1Q05D60 604 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 DMC1Q14565 340 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 SPECC1LQ69YQ0 1117 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 WDR59Q6PJI9 974 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 TMEM92Q6UXU6 159 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 C14orf80Q86SX3 495 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 CHSY1Q86X52 802 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 C3orf20Q8ND61 904 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 SYN2Q92777 582 aaPredicted RBP22.56■■□□□ 1.2
SCN1B-206ENST00000638536 TKTL2Q9H0I9 626 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 ARHGEF38Q9NXL2 777 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 RRN3Q9NYV6 651 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 HS3ST4Q9Y661 456 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 EP300Q09472 2414 aaPredicted RBP22.56■■□□□ 1.2
SCN1B-206ENST00000638536 DOCK4Q8N1I0 1966 aa22.56■■□□□ 1.2
SCN1B-206ENST00000638536 ATG13O75143 517 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms