RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 FUT11Q495W5 492 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 CCDC40Q4G0X9 1142 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 FILIP1LQ4L180 1135 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 USP39Q53GS9 565 aaKnown RBP8.18□□□□□ -1.1
PNKP-229ENST00000637897 PPM1JQ5JR12 505 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 N4BP2L1Q5TBK1 243 aaPredicted RBP8.18□□□□□ -1.1
PNKP-229ENST00000637897 CDKAL1Q5VV42 579 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 RFWD3Q6PCD5 774 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 TMC6Q7Z403 805 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 PPM1KQ8N3J5 372 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 TTC39CQ8N584 583 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 COL26A1Q96A83 441 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 FCRL2Q96LA5 508 aaPredicted RBP8.18□□□□□ -1.1
PNKP-229ENST00000637897 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 LSM14BQ9BX40 385 aaKnown RBP8.18□□□□□ -1.1
PNKP-229ENST00000637897 SLC4A5Q9BY07 1137 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 MTG2Q9H4K7 406 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 CNGB3Q9NQW8 809 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 WDR35Q9P2L0 1181 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 PILRBQ9UKJ0 227 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 INTS6Q9UL03 887 aaKnown RBP8.18□□□□□ -1.1
PNKP-229ENST00000637897 NAALADL1Q9UQQ1 740 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 STON1Q9Y6Q2 735 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 USP24Q9UPU5 2620 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 BICDL2A1A5D9 508 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 I6L893 689 aaPredicted RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 M0QYV0 167 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 RHOBTB1O94844 696 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 IGLV3-25P01717 112 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 AFPP02771 609 aaKnown RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 NCAM1P13591 858 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 HLA-EP13747 358 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 PON1P27169 355 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 CD70P32970 193 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 DHPSP49366 369 aaPredicted RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 BNC1Q01954 994 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 ZNF234Q14588 700 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 AASDHQ4L235 1098 aaPredicted RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 FSCBQ5H9T9 825 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 MIIPQ5JXC2 388 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 PIK3R6Q5UE93 754 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 OTUD1Q5VV17 481 aaPredicted RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 BTBD8Q5XKL5 378 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 TRIM65Q6PJ69 517 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 VSTM4Q8IW00 320 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 SCUBE3Q8IX30 993 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 CHPFQ8IZ52 775 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 ZNF366Q8N895 744 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.17□□□□□ -1.1
PNKP-229ENST00000637897 CCDC112Q8NEF3 446 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 OR2I1PQ8NGU4 316 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 C1orf216Q8TAB5 229 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 ADAM32Q8TC27 787 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 DQX1Q8TE96 717 aaKnown RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 ZNF606Q8WXB4 792 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 PIGKQ92643 395 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 EXOC4Q96A65 974 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 PLD4Q96BZ4 506 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 HSFY1Q96LI6 401 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 XPO6Q96QU8 1125 aaKnown RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 TMEM245Q9H330 911 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 LRRC4Q9HBW1 653 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 CAPN10Q9HC96 672 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 POLMQ9NP87 494 aaPredicted RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 UBE2TQ9NPD8 197 aaPredicted RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 ANLNQ9NQW6 1124 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 SAMSN1Q9NSI8 373 aaKnown RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 ELOVL2Q9NXB9 296 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 USP36Q9P275 1121 aaKnown RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 LSM7Q9UK45 103 aaKnown RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 KIAA1257Q9ULG3 409 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 HBS1LQ9Y450 684 aaKnown RBP8.17□□□□□ -1.1
PNKP-229ENST00000637897 CABIN1Q9Y6J0 2220 aa8.17□□□□□ -1.1
PNKP-229ENST00000637897 A0A1B0GTH6 734 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 GJB3O75712 270 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 KCNK5O95279 499 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 LTFP02788 710 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 SKILP12757 684 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 MAOBP27338 520 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 IRAK1P51617 712 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 RPS24P62847 133 aaKnown RBP8.16□□□□□ -1.1
PNKP-229ENST00000637897 FAM193AP78312 1265 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 ELF2Q15723 593 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 SPECC1LQ69YQ0 1117 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 MMS22LQ6ZRQ5 1243 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 TMEM110Q86TL2 294 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 TAC4Q86UU9 113 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 ARHGAP18Q8N392 663 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 OR52K2Q8NGK3 314 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 CCDC26Q8TAB7 109 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 CYB5D2Q8WUJ1 264 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 IRGQQ8WZA9 623 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 SHC3Q92529 594 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 ZNF419Q96HQ0 510 aaPredicted RBP8.16□□□□□ -1.1
PNKP-229ENST00000637897 MRGPRX3Q96LB0 322 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 NAP1L5Q96NT1 182 aaPredicted RBP8.16□□□□□ -1.1
PNKP-229ENST00000637897 CDK5RAP1Q96SZ6 601 aaKnown RBP8.16□□□□□ -1.1
PNKP-229ENST00000637897 ORAI3Q9BRQ5 295 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms