RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLN6-220ENST00000637450 KDF1Q8NAX2 398 aaPredicted RBP19.24■□□□□ 0.67
CLN6-220ENST00000637450 WFIKKN2Q8TEU8 576 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 HSFY1Q96LI6 401 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 NUP58Q9BVL2 599 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 TMEM245Q9H330 911 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 PLA2G4CQ9UP65 541 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 PCDH15Q96QU1 1955 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 A0A1B0GTW7 788 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 MEI4A8MW99 385 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 PPP1R3GB7ZBB8 358 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 PIK3R2O00459 728 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 IGLV3-27P01718 113 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 C7P10643 843 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 HLA-EP13747 358 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 BMP6P22004 513 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 SGSHP51688 502 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 FAM193AP78312 1265 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 CAMK2GQ13555 558 aaPredicted RBP19.23■□□□□ 0.67
CLN6-220ENST00000637450 HNRNPDQ14103 355 aaKnown RBP19.23■□□□□ 0.67
CLN6-220ENST00000637450 BECN1Q14457 450 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 MPP7Q5T2T1 576 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 DCAF12L1Q5VU92 463 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 FOXR2Q6PJQ5 311 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 CHST9Q7L1S5 443 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 ADIPOR2Q86V24 386 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 UNC45BQ8IWX7 931 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 EHBP1Q8NDI1 1231 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 OR2T3Q8NH03 318 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 CLEC4CQ8WTT0 213 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 CYB5D2Q8WUJ1 264 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 IRX2Q9BZI1 471 aaPredicted RBP19.23■□□□□ 0.67
CLN6-220ENST00000637450 ZDHHC5Q9C0B5 715 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 ABCB8Q9NUT2 735 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 CEP192Q8TEP8 1941 aa19.23■□□□□ 0.67
CLN6-220ENST00000637450 ZZEF1O43149 2961 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 GOLGA6L7A0A1B0GV03 622 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 M0QYV0 167 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 HYAL3O43820 417 aaPredicted RBP19.22■□□□□ 0.67
CLN6-220ENST00000637450 CALCAP01258 141 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 LTFP02788 710 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 BRD2P25440 801 aaKnown RBP19.22■□□□□ 0.67
CLN6-220ENST00000637450 GCNT1Q02742 428 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 GRIK2Q13002 908 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 PTPRNQ16849 979 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 FNDC3BQ53EP0 1204 aaKnown RBP19.22■□□□□ 0.67
CLN6-220ENST00000637450 PIK3R6Q5UE93 754 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 NUGGCQ68CJ6 796 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 RRAGAQ7L523 313 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 NELFBQ8WX92 580 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 GATA6Q92908 595 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 AZIN2Q96A70 460 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 GGA2Q9UJY4 613 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 NEUROG3Q9Y4Z2 214 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
CLN6-220ENST00000637450 WDFY3Q8IZQ1 3526 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 H0Y626 953 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 SH3BP5O60239 455 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 ACSL4O60488 711 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 FBXO21O94952 628 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 TRIM16O95361 564 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 IGF2RP11717 2491 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 PABPC1P11940 636 aaKnown RBP19.21■□□□□ 0.67
CLN6-220ENST00000637450 SLC11A2P49281 568 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 RING1Q06587 406 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 FAM133BQ5BKY9 247 aaKnown RBP19.21■□□□□ 0.67
CLN6-220ENST00000637450 MBLAC2Q68D91 279 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 KLHL10Q6JEL2 608 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 RFWD3Q6PCD5 774 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 CACUL1Q86Y37 369 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 ARHGEF19Q8IW93 802 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 AHI1Q8N157 1196 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 ZCCHC9Q8N567 271 aaKnown RBP19.21■□□□□ 0.67
CLN6-220ENST00000637450 GOLGA1Q92805 767 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 MIR1-1HGQ9H1L0 117 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 PCED1AQ9H1Q7 454 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 ZMIZ1Q9ULJ6 1067 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 AKAP13Q12802 2813 aa19.21■□□□□ 0.67
CLN6-220ENST00000637450 ADAMTS9Q9P2N4 1935 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 BICDL2A1A5D9 508 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 BCAT2O15382 392 aaPredicted RBP19.2■□□□□ 0.66
CLN6-220ENST00000637450 IRAK2O43187 625 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 TBL1XO60907 577 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 FYNP06241 537 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 ATP5BP06576 529 aaKnown RBP19.2■□□□□ 0.66
CLN6-220ENST00000637450 DLDP09622 509 aaKnown RBP19.2■□□□□ 0.66
CLN6-220ENST00000637450 SLC6A4P31645 630 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 RDXP35241 583 aaKnown RBP19.2■□□□□ 0.66
CLN6-220ENST00000637450 RPL34P49207 117 aaKnown RBP19.2■□□□□ 0.66
CLN6-220ENST00000637450 TBX4P57082 545 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 KCNH2Q12809 1159 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 MORC3Q14149 939 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 FAM124AQ86V42 546 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 TRIM59Q8IWR1 403 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 ZNF366Q8N895 744 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 C1orf216Q8TAB5 229 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 WFDC5Q8TCV5 224 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 LMLNQ96KR4 655 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 CAMK1GQ96NX5 476 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 LHX5Q9H2C1 402 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms