RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MARCH2Q9P0N8 246 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 GBF1Q92538 1859 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 ZNF840PA6NDX5 716 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 ZSCAN5CA6NGD5 496 aaPredicted RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 KCNU1A8MYU2 1149 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 I6L893 689 aaPredicted RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 FGF10O15520 208 aaPredicted RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 LRG1P02750 347 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 PECAM1P16284 738 aaPredicted RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 KLRC2P26717 231 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 HOXA9P31269 272 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 SERPINB6P35237 376 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 KCNJ1P48048 391 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 EIF3EP60228 445 aaKnown RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 ERVFC1P60507 584 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 MRPS25P82663 173 aaKnown RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 EFEMP1Q12805 493 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 PAFAH1B3Q15102 231 aaKnown RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 RAB30Q15771 203 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 PABPC1LQ4VXU2 614 aaKnown RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 MANEALQ5VSG8 457 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 NUGGCQ68CJ6 796 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 NCBP2-AS2Q69YL0 99 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 EMBQ6PCB8 327 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 PDZD4Q76G19 769 aaPredicted RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 CDKL3Q8IVW4 592 aaPredicted RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 ELMOD1Q8N336 334 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 ATP6V0D2Q8N8Y2 350 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 ATXN2LQ8WWM7 1075 aaKnown RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 CASKIN2Q8WXE0 1202 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 FCRL2Q96LA5 508 aaPredicted RBP15.87■□□□□ 0.13
CLN6-219ENST00000637329 PCDH9Q9HC56 1237 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 ANLNQ9NQW6 1124 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 OR12D3Q9UGF7 316 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 SFMBT1Q9UHJ3 866 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 SLC12A6Q9UHW9 1150 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 DNMT3LQ9UJW3 386 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 ZNF148Q9UQR1 794 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 NEU2Q9Y3R4 380 aa15.87■□□□□ 0.13
CLN6-219ENST00000637329 ESYT3A0FGR9 886 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 HACD1B0YJ81 288 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 H3BNC9 293 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 DCLK1O15075 740 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 CREB3O43889 395 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 ZMYND10O75800 440 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 ARHGEF15O94989 841 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 C8AP07357 584 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 DNAJB1P25685 340 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 ATP5C1P36542 298 aaKnown RBP15.86■□□□□ 0.13
CLN6-219ENST00000637329 CLCN4P51793 760 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 HECTD3Q5T447 861 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 GSTA5Q7RTV2 222 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 KREMEN2Q8NCW0 462 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 AENQ8WTP8 325 aaKnown RBP15.86■□□□□ 0.13
CLN6-219ENST00000637329 PLD4Q96BZ4 506 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 BTN2A3PQ96KV6 586 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 C1orf74Q96LT6 269 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 C1QTNF1Q9BXJ1 281 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 LMAN2LQ9H0V9 348 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 PLEKHA4Q9H4M7 779 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 DPP7Q9UHL4 492 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 MUC3AQ02505 3323 aa15.86■□□□□ 0.13
CLN6-219ENST00000637329 BCLAF3A2AJT9 711 aaKnown RBP15.85■□□□□ 0.13
CLN6-219ENST00000637329 DAPK3O43293 454 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 PAGE1O75459 146 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 FGF19O95750 216 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 OAS1P00973 400 aaKnown RBP15.85■□□□□ 0.13
CLN6-219ENST00000637329 POU2F2P09086 479 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 RBP3P10745 1247 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 PFKLP17858 780 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 STIP1P31948 543 aaKnown RBP15.85■□□□□ 0.13
CLN6-219ENST00000637329 ELMSAN1Q6PJG2 1045 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 DNAJB7Q7Z6W7 309 aaPredicted RBP15.85■□□□□ 0.13
CLN6-219ENST00000637329 UNC45BQ8IWX7 931 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 BBOF1Q8ND07 529 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 CAVIN3Q969G5 261 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 TBC1D31Q96DN5 1066 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 RTP4Q96DX8 246 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 SNF8Q96H20 258 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 OLFM3Q96PB7 478 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 QKIQ96PU8 341 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLN6-219ENST00000637329 FAM118BQ9BPY3 351 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 CCSER2Q9H7U1 834 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 TMPRSS4Q9NRS4 437 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 WHRNQ9P202 907 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 ASIC3Q9UHC3 531 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 NUDT5Q9UKK9 219 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 NEU3Q9UQ49 428 aa15.85■□□□□ 0.13
CLN6-219ENST00000637329 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.84■□□□□ 0.13
CLN6-219ENST00000637329 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.84■□□□□ 0.13
CLN6-219ENST00000637329 SLC12A8A0AV02 714 aa15.84■□□□□ 0.13
CLN6-219ENST00000637329 HIDE1A8MVS5 230 aa15.84■□□□□ 0.13
CLN6-219ENST00000637329 FAM72CH0Y354 149 aa15.84■□□□□ 0.13
CLN6-219ENST00000637329 SGK1O00141 431 aa15.84■□□□□ 0.13
CLN6-219ENST00000637329 PPP1R12AO14974 1030 aaPredicted RBP15.84■□□□□ 0.13
CLN6-219ENST00000637329 GRM6O15303 877 aa15.84■□□□□ 0.13
CLN6-219ENST00000637329 NCAM2O15394 837 aa15.84■□□□□ 0.13
CLN6-219ENST00000637329 MFSD11O43934 449 aa15.84■□□□□ 0.13
CLN6-219ENST00000637329 LRIG2O94898 1065 aa15.84■□□□□ 0.13
CLN6-219ENST00000637329 MYBL2P10244 700 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms