RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.29
CTSD-208ENST00000636843 FAM207AQ9NSI2 230 aaPredicted RBP13.21□□□□□ -0.29
CTSD-208ENST00000636843 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
CTSD-208ENST00000636843 ARMCX3Q9UH62 379 aaPredicted RBP13.21□□□□□ -0.29
CTSD-208ENST00000636843 PLXND1Q9Y4D7 1925 aa13.21□□□□□ -0.3
CTSD-208ENST00000636843 PI4KAP42356 2102 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 IGHV1OR15-9A0A0B4J2B8 117 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 A0A1W2PQH9 124 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 FANCGO15287 622 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 KRT13P13646 458 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 ARHGAP25P42331 645 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 DGKGP49619 791 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 GFPT1Q06210 699 aaPredicted RBP13.2□□□□□ -0.3
CTSD-208ENST00000636843 ZNF33AQ06730 810 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 Q6ZNB5 142 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 PIP4P1Q86T03 277 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 HDDC3Q8N4P3 179 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 KDF1Q8NAX2 398 aaPredicted RBP13.2□□□□□ -0.3
CTSD-208ENST00000636843 EHBP1Q8NDI1 1231 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 MNS1Q8NEH6 495 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 JAKMIP2Q96AA8 810 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 CCDC42Q96M95 316 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 TWNKQ96RR1 684 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 CDK5RAP1Q96SZ6 601 aaKnown RBP13.2□□□□□ -0.3
CTSD-208ENST00000636843 ACOX2Q99424 681 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 NIF3L1Q9GZT8 377 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 NMUR1Q9HB89 426 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 APOBEC3GQ9HC16 384 aaKnown RBP13.2□□□□□ -0.3
CTSD-208ENST00000636843 CAPN10Q9HC96 672 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 CD248Q9HCU0 757 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 ZNF510Q9Y2H8 683 aa13.2□□□□□ -0.3
CTSD-208ENST00000636843 ATXN2Q99700 1313 aaKnown RBP13.19□□□□□ -0.3
CTSD-208ENST00000636843 TMEM8BA6NDV4 472 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 PCNX2A6NKB5 2137 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 C1QTNF9BB2RNN3 333 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 PRRT4C9JH25 899 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 KRT86O43790 486 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 CILPO75339 1184 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 CISD3P0C7P0 127 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 C1QTNF9P0C862 333 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 RALAP11233 206 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 NDUFV2P19404 249 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 KCNH2Q12809 1159 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 SEMA3BQ13214 749 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 ZNF569Q5MCW4 686 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 KIAA1211LQ6NV74 962 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 TAS1R2Q8TE23 839 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 BAP1Q92560 729 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 FAXDC2Q96IV6 333 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 DUSP16Q9BY84 665 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 ADAM33Q9BZ11 813 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 PDCL3Q9H2J4 239 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 CLIC5Q9NZA1 410 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 NAGPAQ9UK23 515 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 FBXO10Q9UK96 956 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 REXO2Q9Y3B8 237 aaKnown RBP13.19□□□□□ -0.3
CTSD-208ENST00000636843 MRFAP1Q9Y605 127 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 USP3Q9Y6I4 520 aa13.19□□□□□ -0.3
CTSD-208ENST00000636843 SSU72P8A0A1W2PR75 194 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 NPC1O15118 1278 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 MDM4O15151 490 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 OPHN1O60890 802 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 STC2O76061 302 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 AFPP02771 609 aaKnown RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 GCLMP48507 274 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 COG7P83436 770 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 PPP3CAQ08209 521 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 SPA17Q15506 151 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 RRAGAQ7L523 313 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 SCD5Q86SK9 330 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 KIAA1328Q86T90 577 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 FAM186BQ8IYM0 893 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 TTC39CQ8N584 583 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 DEFB119Q8N690 84 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 DCLK3Q9C098 648 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 PLCB1Q9NQ66 1216 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 NUDT5Q9UKK9 219 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 CYP8B1Q9UNU6 501 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 SLC27A6Q9Y2P4 619 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 CFAP47Q6ZTR5 3102 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 MYH10P35580 1976 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 CHD6Q8TD26 2715 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 LRRC53A6NM62 1247 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 EFCAB8A8MWE9 144 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 EPHB6O15197 1021 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 NDUFS2O75306 463 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 LCA5LO95447 670 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 SYPP08247 313 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 TRIM49P0CI25 452 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 TRIM49CP0CI26 452 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 CD58P19256 250 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 SPINK2P20155 84 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 GTF2H1P32780 548 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 CHKAP35790 457 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 PSMC2P35998 433 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms