RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 CHRM1P11229 460 aaPredicted RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 PDGFRAP16234 1089 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 ABCB4P21439 1286 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 HOXD9P28356 352 aaPredicted RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 EIF4A3P38919 411 aaKnown RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 PTPN9P43378 593 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 TNFRSF4P43489 277 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 SGSHP51688 502 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 RPL7AP62424 266 aaKnown RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 DEUP1Q05D60 604 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 MTAPQ13126 283 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 MTA1Q13330 715 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 MAMLD1Q13495 774 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 ASTE1Q2TB18 679 aaPredicted RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 CCDC14Q49A88 953 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 MS4A13Q5J8X5 152 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 MPP7Q5T2T1 576 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 RNF43Q68DV7 783 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 PLEKHA7Q6IQ23 1121 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 DNAJC24Q6P3W2 148 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 Q6ZS52 159 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 C1orf210Q8IVY1 113 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 SFTPA1Q8IWL2 248 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 SPEM1Q8N4L4 309 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 ATP6V0D2Q8N8Y2 350 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 DDI1Q8WTU0 396 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 CENPIQ92674 756 aaPredicted RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 RNF34Q969K3 372 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 MYEOVQ96EZ4 313 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 PRRX2Q99811 253 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 PRMT1Q99873 361 aaKnown RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 DDX50Q9BQ39 737 aaKnown RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 IER2Q9BTL4 223 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 SELENOOQ9BVL4 669 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 SLC2A11Q9BYW1 496 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 KCNH6Q9H252 994 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 WDCPQ9H6R7 721 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 ANLNQ9NQW6 1124 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 ARHGEF4Q9NR80 690 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 ABHD10Q9NUJ1 306 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 DNAJC17Q9NVM6 304 aaKnown RBP10.09□□□□□ -0.79
LINC00339-210ENST00000635675 ARHGEF38Q9NXL2 777 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 SLC12A6Q9UHW9 1150 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 CLEC4EQ9ULY5 219 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 NENFQ9UMX5 172 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 SLC27A6Q9Y2P4 619 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 ATG2BQ96BY7 2078 aa10.09□□□□□ -0.79
LINC00339-210ENST00000635675 ANTXRLA6NF34 631 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 CHURC1-FNTBB4DL54 471 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 AKR1B15C9JRZ8 316 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 I6L893 689 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 ABCB7O75027 752 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 RNF40O75150 1001 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 PAGE1O75459 146 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 ADCY5O95622 1261 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 APODP05090 189 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 GPD1P21695 349 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 SDC4P31431 198 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 RDXP35241 583 aaKnown RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 ZNF143P52747 638 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 ATXN1P54253 815 aaKnown RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 ATP11AP98196 1134 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 KDSRQ06136 332 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 TSR1Q2NL82 804 aaKnown RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 C15orf59Q2T9L4 293 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 PREPLQ4J6C6 727 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 RAB6CQ53S08 254 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 BRMS1LQ5PSV4 323 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 SH3PXD2AQ5TCZ1 1133 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 GRAMD4Q6IC98 578 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 PKN3Q6P5Z2 889 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 SND1Q7KZF4 910 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 CNGA4Q8IV77 575 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 MAML2Q8IZL2 1156 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 TC2NQ8N9U0 490 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 PRSS33Q8NF86 280 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 PRICKLE1Q96MT3 831 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 CHP1Q99653 195 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 RAB6CQ9H0N0 254 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 PARVAQ9NVD7 372 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 SPATA6Q9NWH7 488 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 ZNHIT6Q9NWK9 470 aaKnown RBP10.08□□□□□ -0.8
LINC00339-210ENST00000635675 PAXBP1Q9Y5B6 917 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 MUC6Q6W4X9 2439 aa10.08□□□□□ -0.8
LINC00339-210ENST00000635675 SSU72P8A0A1W2PR75 194 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 TBC1D3BA6NDS4 549 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 TMEM191CA6NGB0 347 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 PRRT4C9JH25 899 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ATMINO43313 823 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 TBL1XO60907 577 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 MYBL1P10243 752 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 COL9A1P20849 921 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 TACR2P21452 398 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 KIR2DL1P43626 348 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 DGKGP49619 791 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 HDAC4P56524 1084 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 RPS24P62847 133 aaKnown RBP10.07□□□□□ -0.8
LINC00339-210ENST00000635675 TCF15Q12870 199 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 ANGPT1Q15389 498 aa10.07□□□□□ -0.8
LINC00339-210ENST00000635675 SLC18A3Q16572 532 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms