RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 DNTTIP2Q5QJE6 756 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 FAM160B1Q5W0V3 765 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 RAB12Q6IQ22 244 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 PGBD2Q6P3X8 592 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 SYNE3Q6ZMZ3 975 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 FAM47EQ6ZV65 393 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 PLEKHM3Q6ZWE6 761 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC91Q7Z6B0 441 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 MTERF4Q7Z6M4 381 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 DNAJB7Q7Z6W7 309 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 GAS2L3Q86XJ1 694 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ADGRG3Q86Y34 549 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 UNC45BQ8IWX7 931 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 OR8H3Q8N146 312 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 DCLK2Q8N568 766 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 DNAJC5GQ8N7S2 189 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 OR56A1Q8NGH5 318 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ADAMTS15Q8TE58 950 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 FUBP1Q96AE4 644 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 MARS2Q96GW9 593 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 TMEM41AQ96HV5 264 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 SNX22Q96L94 193 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC114Q96M63 670 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 C7orf26Q96N11 449 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 RBM14Q96PK6 669 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 PNKPQ96T60 521 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 MESP1Q9BRJ9 268 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 MMTAG2Q9BU76 263 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CNPPD1Q9BV87 410 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 UTP14AQ9BVJ6 771 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 IMPG2Q9BZV3 1241 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 IQCGQ9H095 443 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 SIK2Q9H0K1 926 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 VPS37BQ9H9H4 285 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 LIN28AQ9H9Z2 209 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CERS4Q9HA82 394 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 PNPLA8Q9NP80 782 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 A1CFQ9NQ94 594 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ADARB2Q9NS39 739 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 SACM1LQ9NTJ5 587 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 TCP11L1Q9NUJ3 509 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 MCM9Q9NXL9 1143 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 PSD3Q9NYI0 1048 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 SEPT10Q9P0V9 454 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF624Q9P2J8 865 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 MYO1AQ9UBC5 1043 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 XPR1Q9UBH6 696 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 GRHPRQ9UBQ7 328 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 VPS28Q9UK41 221 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CAPN11Q9UMQ6 739 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 MRPL11Q9Y3B7 192 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 KIF3AQ9Y496 699 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CYP2D7A0A087X1C5 515 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 A0A0B4J269 797 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 A0A1B0GTW7 788 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 GRID2IPA4D2P6 1211 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 PI4KAP2A4QPH2 592 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 E7ENX8 843 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 PYCARD-AS1I3L0S3 204 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 AP3B1O00203 1094 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CACNB4O00305 520 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 RTN2O75298 545 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 KRT38O76015 456 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 SUN1O94901 812 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 PAHP00439 452 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 OPN1MWP04001 364 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CFIP05156 583 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 ANXA2P07355 339 aaKnown RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TSPY4P0CV99 314 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TSPY10P0CW01 314 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 OPN1MW2P0DN77 364 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 OPN1MW3P0DN78 364 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TXNP10599 105 aaKnown RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CDK4P11802 303 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 LAG3P18627 525 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 FGFR2P21802 821 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 FGFR4P22455 802 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 ZFP36P26651 326 aaKnown RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 PDIA3P30101 505 aaKnown RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 MSH2P43246 934 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 AVPR1BP47901 424 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 RNASE9P60153 205 aaKnown RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CTAG1AP78358 180 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 BLOC1S1P78537 153 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TAP2Q03519 686 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 OCA2Q04671 838 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 ZBTB16Q05516 673 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 KLHL30Q0D2K2 578 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 PRKG1Q13976 671 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 KRT32Q14532 448 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 KCNB1Q14721 858 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 TAF5Q15542 800 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 SLC35G1Q2M3R5 365 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 ERCC6LQ2NKX8 1250 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 PREPLQ4J6C6 727 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 PDCD4Q53EL6 469 aaKnown RBP3.17□□□□□ -1.9
PSPC1-208ENST00000635562 CEP55Q53EZ4 464 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 HECTD2Q5U5R9 776 aa3.17□□□□□ -1.9
PSPC1-208ENST00000635562 DCAF12L1Q5VU92 463 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms