RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 WDR59Q6PJI9 974 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 FOXR2Q6PJQ5 311 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 RTL10Q7L3V2 364 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ARMCX6Q7L4S7 300 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ITIH5Q86UX2 942 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 GPBP1Q86WP2 473 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 RALGPS2Q86X27 583 aaPredicted RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 SCN4BQ8IWT1 228 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TMEM161BQ8NDZ6 487 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 BEST2Q8NFU1 509 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 OR10T2Q8NGX3 314 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 GOLGA1Q92805 767 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CHFRQ96EP1 664 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 IKZF4Q9H2S9 585 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 SOX17Q9H6I2 414 aaPredicted RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 FBRSL1Q9HCM7 1045 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ZDHHC4Q9NPG8 344 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 LZTFL1Q9NQ48 299 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ARGLU1Q9NWB6 273 aaPredicted RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 LARSQ9P2J5 1176 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ATXN7L1Q9ULK2 861 aaPredicted RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ARID2Q68CP9 1835 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ZMYM2Q9UBW7 1377 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 SMG1Q96Q15 3661 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 BICDL2A1A5D9 508 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 OTOL1A6NHN0 477 aaPredicted RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 C4orf47A7E2U8 309 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CYB561D2O14569 222 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 NDUFA10O95299 355 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 VNN2O95498 520 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 PLA2G4BP0C869 781 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 PLS3P13797 630 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ACAT1P24752 427 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 PMLP29590 882 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 MPLP40238 635 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 LILRA4P59901 499 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 STK4Q13043 487 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 GPR17Q13304 367 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 FIGNQ5HY92 759 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 DGKKQ5KSL6 1271 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 C1orf186Q6ZWK4 172 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 METTL23Q86XA0 190 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TMC8Q8IU68 726 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 SLC35F6Q8N357 371 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 LEMD2Q8NC56 503 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 MSANTD4Q8NCY6 345 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 OR8K1Q8NGG5 319 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 NELL1Q92832 810 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ERGIC2Q96RQ1 377 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CYP2S1Q96SQ9 504 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CHP1Q99653 195 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 SLC46A2Q9BY10 475 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 HAPLN2Q9GZV7 340 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CAAP1Q9H8G2 361 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 EXOC1Q9NV70 894 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TBC1D7Q9P0N9 293 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TICRRQ7Z2Z1 1910 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 PVALEFA0A1B0GWK0 134 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 A0A1W2PQJ5 194 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 OR6C75A6NL08 312 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TBCAO75347 108 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 PAPLNO95428 1278 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 EGFP01133 1207 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 KRT19P08727 400 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 POU2F2P09086 479 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TDGF1P13385 188 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 FAM193AP78312 1265 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TFAMQ00059 246 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CDK17Q00537 523 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 FCHO2Q0JRZ9 810 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TMEM132DQ14C87 1099 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CCDC142Q17RM4 750 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ZNF569Q5MCW4 686 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 ANKRD40Q6AI12 368 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 VHLLQ6RSH7 139 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TMCO3Q6UWJ1 677 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CACNA2D4Q7Z3S7 1137 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 RPLP0P6Q8NHW5 317 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 MRPS31Q92665 395 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 PSMG2Q969U7 264 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 E2F7Q96AV8 911 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CNOT6LQ96LI5 555 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TUBGCP2Q9BSJ2 902 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 EDEM2Q9BV94 578 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 CCDC86Q9H6F5 360 aaKnown RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 TASP1Q9H6P5 420 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 AVENQ9NQS1 362 aaPredicted RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 REV1Q9UBZ9 1251 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 RAB21Q9UL25 225 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 WNT6Q9Y6F9 365 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 EPN1Q9Y6I3 576 aaPredicted RBP5.11□□□□□ -1.59
LINC00550-201ENST00000629293 WDFY3Q8IZQ1 3526 aa5.11□□□□□ -1.59
LINC00550-201ENST00000629293 MYBPHLA2RUH7 354 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 CTAGE9A4FU28 777 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ARNTLO00327 626 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ABLIM1O14639 778 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 OAZ2O95190 189 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 ATF6P18850 670 aa5.1□□□□□ -1.59
LINC00550-201ENST00000629293 DHPSP49366 369 aaPredicted RBP5.1□□□□□ -1.59
LINC00550-201ENST00000629293 TUFMP49411 452 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms