RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 PCGF5Q86SE9 256 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 RSAD2Q8WXG1 361 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 NDRG1Q92597 394 aaKnown RBP10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 PKNOX2Q96KN3 472 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 CORO1BQ9BR76 489 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 HEMGNQ9BXL5 484 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 PRKD2Q9BZL6 878 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 ATXN3LQ9H3M9 355 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 NSUN3Q9H649 340 aaKnown RBP10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 KIF9Q9HAQ2 790 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 NMUR1Q9HB89 426 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 FAM114A2Q9NRY5 505 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 RBM12Q9NTZ6 932 aaKnown RBP10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 PPARGC1AQ9UBK2 798 aaKnown RBP10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 SFMBT1Q9UHJ3 866 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 YBX2Q9Y2T7 364 aaKnown RBP10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 SH3BP1Q9Y3L3 701 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 DNAH12Q6ZR08 3092 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 GBF1Q92538 1859 aa10.49□□□□□ -0.73
FOXCUT-201ENST00000628509 SLC9A3R1O14745 358 aaPredicted RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 NEBLO76041 1014 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 OAS1P00973 400 aaKnown RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 F11P03951 625 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 CKMP06732 381 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 ITGAVP06756 1048 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 MYL4P12829 197 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 COILP38432 576 aaPredicted RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 ARSEP51690 589 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 CDR1P51861 262 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 EPHA5P54756 1037 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 MLLT6P55198 1093 aaPredicted RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 KLF1Q13351 362 aaPredicted RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 BRD3Q15059 726 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 ATP13A4Q4VNC1 1196 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 ZC3H12AQ5D1E8 599 aaKnown RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 SLC9A4Q6AI14 798 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 TIGD7Q6NT04 549 aaPredicted RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 SPNS2Q8IVW8 549 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 CCDC185Q8N715 623 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 ADAM32Q8TC27 787 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 SLC22A17Q8WUG5 538 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 NSMCE1Q8WV22 266 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 NKD2Q969F2 451 aaPredicted RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 SLC39A13Q96H72 371 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 FCRL2Q96LA5 508 aaPredicted RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 CSPG4P5Q96PW8 444 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 PEBP4Q96S96 227 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 SIK2Q9H0K1 926 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 TRPC7Q9HCX4 862 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 KLHL11Q9NVR0 708 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 TBC1D14Q9P2M4 693 aa10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 MTRF1LQ9UGC7 380 aaKnown RBP10.48□□□□□ -0.73
FOXCUT-201ENST00000628509 COL4A4P53420 1690 aaPredicted RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 GOLGA6CA6NDK9 693 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 GOLGA6BA6NDN3 693 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 C3orf70A6NLC5 250 aaPredicted RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 H7C0C1 242 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 SGK1O00141 431 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 PDE2AO00408 941 aaPredicted RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 CCL16O15467 120 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 COCHO43405 550 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 LIASO43766 372 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 PAGE1O75459 146 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 HEXIM1O94992 359 aaKnown RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 MOCS2O96007 188 aaPredicted RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 IGLV3-27P01718 113 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 CYBBP04839 570 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 SPATA31D3P0C874 917 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 GOLGA6DP0CG33 693 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 KRT10P13645 584 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 RHOQP17081 205 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 ATP5OP48047 213 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 MAPKAPK2P49137 400 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 EMP3P54852 163 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 DRG2P55039 364 aaKnown RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 VCPP55072 806 aaKnown RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 EIF3EP60228 445 aaKnown RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 DYNLT1P63172 113 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 SLC7A9P82251 487 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 MLLT1Q03111 559 aaPredicted RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 MMRN1Q13201 1228 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 EIF4EBP2Q13542 120 aaPredicted RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 NOMO1Q15155 1222 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 ANO4Q32M45 955 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 LRIT3Q3SXY7 679 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 TMCO4Q5TGY1 634 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 DAB2IPQ5VWQ8 1189 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 HEATR6Q6AI08 1181 aaKnown RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 CES5AQ6NT32 575 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 RWDD4Q6NW29 188 aaKnown RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 WDR93Q6P2C0 686 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 DARS2Q6PI48 645 aaKnown RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 SPATA31D4Q6ZUB0 917 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 ADAT2Q7Z6V5 191 aaKnown RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 CHSY1Q86X52 802 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 BBS5Q8N3I7 341 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 SMG7Q92540 1137 aaKnown RBP10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 E2F7Q96AV8 911 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 OTUB2Q96DC9 234 aa10.47□□□□□ -0.73
FOXCUT-201ENST00000628509 KCTD15Q96SI1 283 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms