RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 MSI1O43347 362 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 LIASO43766 372 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 ERLIN1O75477 346 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 ARHGEF15O94989 841 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 CSPG5O95196 566 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 ECEL1O95672 775 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 CNPP09543 421 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 MYBL2P10244 700 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 RARGP13631 454 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 MYOGP15173 224 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 PECAM1P16284 738 aaPredicted RBP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 ELF1P32519 619 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 ALDH1A3P47895 512 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 AIF1P55008 147 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 RAB15P59190 212 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 OTUD4Q01804 1114 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 SCAPQ12770 1279 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 EIF4EBP2Q13542 120 aaPredicted RBP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 TRADDQ15628 312 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 ARL13BQ3SXY8 428 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 MSANTD2Q6P1R3 559 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 DRICH1Q6PGQ1 229 aaPredicted RBP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 NPNTQ6UXI9 565 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 TMC7Q7Z402 723 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 ATL2Q8NHH9 583 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 PCDH19Q8TAB3 1148 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 ACTL9Q8TC94 416 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 GRK7Q8WTQ7 553 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 IFT81Q8WYA0 676 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 SLCO2A1Q92959 643 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 RNF34Q969K3 372 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 PBXIP1Q96AQ6 731 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 CCDC114Q96M63 670 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 CSPG4P5Q96PW8 444 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 C17orf80Q9BSJ5 609 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 TTLL2Q9BWV7 592 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 TRIM31Q9BZY9 425 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 RAB17Q9H0T7 212 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 DPH5Q9H2P9 285 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 CLIC5Q9NZA1 410 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 CWC15Q9P013 229 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 DNPEPQ9ULA0 475 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 UTP11Q9Y3A2 253 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 RWDD3Q9Y3V2 267 aa10.29□□□□□ -0.76
SOX2-OT-244ENST00000627738 PLXNA4Q9HCM2 1894 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 H3BRJ5 948 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 I6L893 689 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 APOC4-APOC2K7ER74 178 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 EEF2KO00418 725 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 DAPK3O43293 454 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 TGM5O43548 720 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 CREB3O43889 395 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 SEC31AO94979 1220 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 APOC2P02655 101 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 ZDHHC11BP0C7U3 371 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 SPATA31D3P0C874 917 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 CSH1P0DML2 217 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 CSH2P0DML3 217 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 HMGA1P17096 107 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 GOT1P17174 413 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 TGM2P21980 687 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 AMPD1P23109 780 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 TNFRSF8P28908 595 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 ARL4AP40617 200 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 MAGEA10P43363 369 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 CARSP49589 748 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 VCPP55072 806 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 ERVFC1P60507 584 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 RBM10P98175 930 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 TWF1Q12792 350 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 EFEMP1Q12805 493 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 BYSLQ13895 437 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 PPP1R7Q15435 360 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 SHHQ15465 462 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 TAF12Q16514 161 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 COL13A1Q5TAT6 717 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 PLPP4Q5VZY2 271 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 SLC9A4Q6AI14 798 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 FAM109BQ6ICB4 259 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 C1orf228Q6PIY5 440 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 TMCO3Q6UWJ1 677 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 SPATA31D4Q6ZUB0 917 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 SPRED2Q7Z698 418 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 DDX42Q86XP3 938 aaKnown RBP eCLIP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 TCEAL8Q8IYN2 117 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 DEPDC4Q8N2C3 294 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 PLD5Q8N7P1 536 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 SLC35B2Q8TB61 432 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 SPPL3Q8TCT6 385 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 POF1BQ8WVV4 589 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 SERPINB11Q96P15 392 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 KLHL5Q96PQ7 755 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 TCF25Q9BQ70 676 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 ERP44Q9BS26 406 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 FRMD8P1Q9BZ68 369 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 ENTPD7Q9NQZ7 604 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 ARHGEF38Q9NXL2 777 aa10.28□□□□□ -0.76
SOX2-OT-244ENST00000627738 RCOR3Q9P2K3 495 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms