RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 TERB1Q8NA31 727 aa4.62□□□□□ -1.67
CDR1-202ENST00000625883 MAFAQ8NHW3 353 aaPredicted RBP4.62□□□□□ -1.67
CDR1-202ENST00000625883 HTRA1Q92743 480 aa4.62□□□□□ -1.67
CDR1-202ENST00000625883 REPS1Q96D71 796 aa4.62□□□□□ -1.67
CDR1-202ENST00000625883 TMPRSS5Q9H3S3 457 aa4.62□□□□□ -1.67
CDR1-202ENST00000625883 TMLHEQ9NVH6 421 aa4.62□□□□□ -1.67
CDR1-202ENST00000625883 GAR1Q9NY12 217 aaKnown RBP4.62□□□□□ -1.67
CDR1-202ENST00000625883 ADAM21Q9UKJ8 722 aa4.62□□□□□ -1.67
CDR1-202ENST00000625883 PNMA2Q9UL42 364 aa4.62□□□□□ -1.67
CDR1-202ENST00000625883 ENTPD2Q9Y5L3 495 aa4.62□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3DA0A087WVF3 549 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3IA0A087WXS9 549 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3EA0A087X179 549 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3KA0A087X1G2 549 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3BA6NDS4 549 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3FA6NER0 549 aaPredicted RBP4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3LB9A6J9 549 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 J3KRW8 73 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 FYB1O15117 783 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 C1RP00736 705 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3HP0C7X1 549 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 IGFBP2P18065 325 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 RCAN1P53805 252 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 DLGAP5Q15398 846 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 SLC4A8Q2Y0W8 1093 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 CTXN3Q4LDR2 81 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3GQ6DHY5 549 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3CQ6IPX1 549 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 WDR93Q6P2C0 686 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 SLC29A4Q7RTT9 530 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 HEATR4Q86WZ0 1026 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 TBC1D3Q8IZP1 549 aaPredicted RBP4.61□□□□□ -1.67
CDR1-202ENST00000625883 PTGR2Q8N8N7 351 aaPredicted RBP4.61□□□□□ -1.67
CDR1-202ENST00000625883 LINS1Q8NG48 757 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 MPP4Q96JB8 637 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 PIGSQ96S52 555 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 NPAS1Q99742 590 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 REEP2Q9BRK0 252 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 NOD2Q9HC29 1040 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 BAG5Q9UL15 447 aa4.61□□□□□ -1.67
CDR1-202ENST00000625883 CYP3A7-CYP3A51PA0A087WV96 503 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 TCRBV5S1A1TA0A578 114 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 VWA3AA6NCI4 1184 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 TMEM191CA6NGB0 347 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 PRRT4C9JH25 899 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 H3BNC9 293 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 PRYO14603 147 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 FOXN1O15353 648 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 EXOC3O60645 756 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 MT-CO3P00414 261 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 ACP5P13686 325 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 CHN1P15882 459 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 PROZP22891 400 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 SFPQP23246 707 aaKnown RBP eCLIP4.6□□□□□ -1.67
CDR1-202ENST00000625883 CYP3A7P24462 503 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 NDUFS1P28331 727 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 LIFRP42702 1097 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 AGTR2P50052 363 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 WDR5P61964 334 aaKnown RBP4.6□□□□□ -1.67
CDR1-202ENST00000625883 TRPC3Q13507 836 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 MFSD13AQ14CX5 517 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 TSTD2Q5T7W7 516 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 GRASPQ7Z6J2 395 aaPredicted RBP4.6□□□□□ -1.67
CDR1-202ENST00000625883 LDLRAD3Q86YD5 345 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 LAS2Q8IYD9 372 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 FSIP1Q8NA03 581 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 AKAP1Q92667 903 aaKnown RBP eCLIP4.6□□□□□ -1.67
CDR1-202ENST00000625883 ARRDC3Q96B67 414 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 PRRX2Q99811 253 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 RNF26Q9BY78 433 aaPredicted RBP4.6□□□□□ -1.67
CDR1-202ENST00000625883 UBN1Q9NPG3 1134 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 IL17RBQ9NRM6 502 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 SLC13A4Q9UKG4 626 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 PACSIN3Q9UKS6 424 aa4.6□□□□□ -1.67
CDR1-202ENST00000625883 COPG1Q9Y678 874 aaKnown RBP4.6□□□□□ -1.67
CDR1-202ENST00000625883 C3orf70A6NLC5 250 aaPredicted RBP4.59□□□□□ -1.67
CDR1-202ENST00000625883 A6NLC8 198 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 GRM8O00222 908 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 CLIC1O00299 241 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 SEPT4O43236 478 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 HNRNPRO43390 633 aaKnown RBP4.59□□□□□ -1.67
CDR1-202ENST00000625883 FSHBP01225 129 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 ALDOAP04075 364 aaKnown RBP4.59□□□□□ -1.67
CDR1-202ENST00000625883 HNRNPCP07910 306 aaKnown RBP eCLIP4.59□□□□□ -1.67
CDR1-202ENST00000625883 STAT6P42226 847 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 VAMP2P63027 116 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 G3BP1Q13283 466 aaKnown RBP eCLIP4.59□□□□□ -1.67
CDR1-202ENST00000625883 LARS2Q15031 903 aaKnown RBP4.59□□□□□ -1.67
CDR1-202ENST00000625883 ANKRD1Q15327 319 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 FAM153CQ494X1 144 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 ATG16L1Q676U5 607 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 RETSATQ6NUM9 610 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 CEP85Q6P2H3 762 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 TRIM72Q6ZMU5 477 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 USP38Q8NB14 1042 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 SEC62Q99442 399 aaKnown RBP4.59□□□□□ -1.67
CDR1-202ENST00000625883 TIMP4Q99727 224 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 ADGRE3Q9BY15 652 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 GPR63Q9BZJ6 419 aa4.59□□□□□ -1.67
CDR1-202ENST00000625883 PDE11AQ9HCR9 933 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms