RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 TXLNGQ9NUQ3 528 aa12.05□□□□□ -0.48
CHD2-205ENST00000625662 ARHGAP26Q9UNA1 814 aa12.05□□□□□ -0.48
CHD2-205ENST00000625662 COL2A1P02458 1487 aaPredicted RBP12.05□□□□□ -0.48
CHD2-205ENST00000625662 PRNPP04156 253 aa12.05□□□□□ -0.48
CHD2-205ENST00000625662 PBLDP30039 288 aaPredicted RBP12.05□□□□□ -0.48
CHD2-205ENST00000625662 NPY2RP49146 381 aa12.05□□□□□ -0.48
CHD2-205ENST00000625662 ARID5BQ14865 1188 aa12.05□□□□□ -0.48
CHD2-205ENST00000625662 MCOLN2Q8IZK6 566 aa12.05□□□□□ -0.48
CHD2-205ENST00000625662 MAB21L3Q8N8X9 362 aa12.05□□□□□ -0.48
CHD2-205ENST00000625662 RBM15Q96T37 977 aaKnown RBP eCLIP12.05□□□□□ -0.485e-7■■■□□ 18.5
CHD2-205ENST00000625662 PYCARDQ9ULZ3 195 aa12.05□□□□□ -0.48
CHD2-205ENST00000625662 PACSIN2Q9UNF0 486 aaPredicted RBP12.05□□□□□ -0.48
CHD2-205ENST00000625662 HBS1LQ9Y450 684 aaKnown RBP12.05□□□□□ -0.48
CHD2-205ENST00000625662 COL16A1Q07092 1604 aaPredicted RBP12.05□□□□□ -0.48
CHD2-205ENST00000625662 IL1BP01584 269 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 RB1P06400 928 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 MYL2P10916 166 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 SP100P23497 879 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 IL1RL1Q01638 556 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 SPOCD1Q6ZMY3 1216 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 RIBC1Q8N443 379 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 FAM71DQ8N9W8 422 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 NPLOC4Q8TAT6 608 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 TRIM63Q969Q1 353 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 SMYD3Q9H7B4 428 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 VANGL2Q9ULK5 521 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 SNX12Q9UMY4 172 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 CRYBG1Q9Y4K1 1723 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 ERI2A8K979 691 aaKnown RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 PURAQ00577 322 aaKnown RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 MLLT1Q03111 559 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 BEND7Q8N7W2 519 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 PPWD1Q96BP3 646 aaKnown RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 SLC39A8Q9C0K1 460 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 TASP1Q9H6P5 420 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 YY1AP1Q9H869 796 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 FAF1Q9UNN5 650 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 NOVA2Q9UNW9 492 aaKnown RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 ATP1A2P50993 1020 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 KRT72Q14CN4 511 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 PIGZQ86VD9 579 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 PLD4Q96BZ4 506 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 ZDHHC9Q9Y397 364 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 PER2O15055 1255 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 PLEKP08567 350 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 SNRPAP09012 282 aaKnown RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 NCAPHQ15003 741 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 PDCD2Q16342 344 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 HP1BP3Q5SSJ5 553 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 EEF1DP3Q658K8 133 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 SLC13A5Q86YT5 568 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 THAP2Q9H0W7 228 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 PSMC3IPQ9P2W1 217 aaPredicted RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 VAV3Q9UKW4 847 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.04□□□□□ -0.48
CHD2-205ENST00000625662 LTBP4Q8N2S1 1624 aa12.04□□□□□ -0.48
CHD2-205ENST00000625662 ATMINO43313 823 aaPredicted RBP12.03□□□□□ -0.48
CHD2-205ENST00000625662 C11orf63Q6NUN7 778 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 CYLDQ9NQC7 956 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 RGPD8O14715 1765 aaPredicted RBP12.03□□□□□ -0.48
CHD2-205ENST00000625662 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 NWD2Q9ULI1 1742 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 ARL5CA6NH57 179 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 CCNE2O96020 404 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 CNTN1Q12860 1018 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 INSCQ1MX18 579 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 BMT2Q1RMZ1 405 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 HLA-DQA1Q5Y7H0 255 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 RAP1GAP2Q684P5 730 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 LRRC8EQ6NSJ5 796 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 MYCBPAPQ8TBZ2 947 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 SLC35C1Q96A29 364 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 ST6GALNAC4Q9H4F1 302 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 GUCY1B2O75343 617 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 GPR1P46091 355 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 HDDC3Q8N4P3 179 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 TIFAQ96CG3 184 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 PHPT1Q9NRX4 125 aaPredicted RBP12.03□□□□□ -0.48
CHD2-205ENST00000625662 MORC2Q9Y6X9 1032 aaPredicted RBP12.03□□□□□ -0.48
CHD2-205ENST00000625662 WDR91A4D1P6 747 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 B4GALT5O43286 388 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 GCATO75600 419 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 C22orf31O95567 290 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 CNTFP26441 200 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 PIK3CGP48736 1102 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 TSTD1Q8NFU3 115 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 BTBD6Q96KE9 485 aa12.03□□□□□ -0.48
CHD2-205ENST00000625662 NDRG2Q9UN36 371 aaKnown RBP12.03□□□□□ -0.48
CHD2-205ENST00000625662 A0A0B4J269 797 aa12.02□□□□□ -0.48
CHD2-205ENST00000625662 PDGFRLQ15198 375 aa12.02□□□□□ -0.48
CHD2-205ENST00000625662 SLC47A2Q86VL8 602 aa12.02□□□□□ -0.48
CHD2-205ENST00000625662 MCRS1Q96EZ8 462 aa12.02□□□□□ -0.48
CHD2-205ENST00000625662 BTN2A3PQ96KV6 586 aa12.02□□□□□ -0.48
CHD2-205ENST00000625662 SNX27Q96L92 541 aa12.02□□□□□ -0.48
CHD2-205ENST00000625662 PEAK1Q9H792 1746 aa12.02□□□□□ -0.48
CHD2-205ENST00000625662 SLC20A2Q08357 652 aa12.02□□□□□ -0.49
CHD2-205ENST00000625662 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.49
CHD2-205ENST00000625662 SUZ12Q15022 739 aaKnown RBP12.02□□□□□ -0.49
CHD2-205ENST00000625662 CYP2A13Q16696 494 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms