RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 ABCB8Q9NUT2 735 aa13.58□□□□□ -0.24
ATRX-208ENST00000622960 DNAJC12Q9UKB3 198 aa13.58□□□□□ -0.24
ATRX-208ENST00000622960 PLXND1Q9Y4D7 1925 aa13.58□□□□□ -0.24
ATRX-208ENST00000622960 THADAQ6YHU6 1953 aa13.58□□□□□ -0.24
ATRX-208ENST00000622960 MED19A0JLT2 244 aaPredicted RBP13.57□□□□□ -0.24
ATRX-208ENST00000622960 MEI4A8MW99 385 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 HSF2BPO75031 334 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 CFIP05156 583 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 GLI1P08151 1106 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 PABPC1P11940 636 aaKnown RBP13.57□□□□□ -0.24
ATRX-208ENST00000622960 ABCB4P21439 1286 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 IL12RB1P42701 662 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 RPL34P49207 117 aaKnown RBP13.57□□□□□ -0.24
ATRX-208ENST00000622960 CDK17Q00537 523 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 FUT11Q495W5 492 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 HSP90AA4PQ58FG1 418 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 WDR45BQ5MNZ6 344 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 FKBP15Q5T1M5 1219 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 KIAA1211LQ6NV74 962 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 SASS6Q6UVJ0 657 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 CHSY1Q86X52 802 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 PASD1Q8IV76 773 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 RGL4Q8IZJ4 473 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 ATP6V0D2Q8N8Y2 350 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 SIPA1Q96FS4 1042 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 PPP1R13BQ96KQ4 1090 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 MRGPRX1Q96LB2 322 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 FBRSQ9HAH7 460 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 STIM2Q9P246 746 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 SUSD2Q9UGT4 822 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 EVLQ9UI08 416 aaPredicted RBP13.57□□□□□ -0.24
ATRX-208ENST00000622960 PCDHGC3Q9UN70 934 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 NAALADL1Q9UQQ1 740 aa13.57□□□□□ -0.24
ATRX-208ENST00000622960 ATXN2Q99700 1313 aaKnown RBP13.57□□□□□ -0.24
ATRX-208ENST00000622960 FRYLO94915 3013 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 IGHV1OR15-9A0A0B4J2B8 117 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 LNP1A1A4G5 178 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 WASH3PC4AMC7 463 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 H0Y626 953 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 PAPSS1O43252 624 aaPredicted RBP13.56□□□□□ -0.24
ATRX-208ENST00000622960 TRUB2O95900 331 aaKnown RBP13.56□□□□□ -0.24
ATRX-208ENST00000622960 GNSP15586 552 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 CD6P30203 668 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 HLA-FP30511 346 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 OXTRP30559 389 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 PTGER3P43115 390 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 ZNF33AQ06730 810 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 DCAF6Q58WW2 860 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 RABGAP1LQ5R372 815 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 PIK3R6Q5UE93 754 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 RNF219Q5W0B1 726 aaPredicted RBP13.56□□□□□ -0.24
ATRX-208ENST00000622960 RFWD3Q6PCD5 774 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 CLEC17AQ6ZS10 378 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 C11orf57Q6ZUT1 292 aaPredicted RBP13.56□□□□□ -0.24
ATRX-208ENST00000622960 TMEM110Q86TL2 294 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 TAC4Q86UU9 113 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 IRF2BP1Q8IU81 584 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 CARNMT1Q8N4J0 409 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 TMEM35BQ8NCS4 154 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 ADAM32Q8TC27 787 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 BTN2A3PQ96KV6 586 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 HSPA12BQ96MM6 686 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 LHX5Q9H2C1 402 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.56□□□□□ -0.24
ATRX-208ENST00000622960 ASNSD1Q9NWL6 643 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 MBD1Q9UIS9 605 aaPredicted RBP13.56□□□□□ -0.24
ATRX-208ENST00000622960 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
ATRX-208ENST00000622960 CEP250Q9BV73 2442 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 BECN2A8MW95 431 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 F5H5T6 163 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 GABBR2O75899 941 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 ASLP04424 464 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 DLDP09622 509 aaKnown RBP13.55□□□□□ -0.24
ATRX-208ENST00000622960 CCR1P32246 355 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 APBA1Q02410 837 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
ATRX-208ENST00000622960 SFSWAPQ12872 951 aaKnown RBP13.55□□□□□ -0.24
ATRX-208ENST00000622960 DUOXA1Q1HG43 343 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 TTC31Q49AM3 519 aaPredicted RBP13.55□□□□□ -0.24
ATRX-208ENST00000622960 FAM133BQ5BKY9 247 aaKnown RBP13.55□□□□□ -0.24
ATRX-208ENST00000622960 TCP11X2Q5H9J9 407 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 TTC39BQ5VTQ0 682 aaPredicted RBP13.55□□□□□ -0.24
ATRX-208ENST00000622960 MBLAC2Q68D91 279 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 OR6B2Q6IFH4 312 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 LRSAM1Q6UWE0 723 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
ATRX-208ENST00000622960 METTL3Q86U44 580 aaKnown RBP13.55□□□□□ -0.24
ATRX-208ENST00000622960 CACUL1Q86Y37 369 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 TMPRSS6Q8IU80 811 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 ZDHHC17Q8IUH5 632 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.55□□□□□ -0.24
ATRX-208ENST00000622960 C1orf131Q8NDD1 294 aaKnown RBP13.55□□□□□ -0.24
ATRX-208ENST00000622960 FCRL2Q96LA5 508 aaPredicted RBP13.55□□□□□ -0.24
ATRX-208ENST00000622960 ACP6Q9NPH0 428 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 LMBRD1Q9NUN5 540 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 DDIT4Q9NX09 232 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 HCN2Q9UL51 889 aa13.55□□□□□ -0.24
ATRX-208ENST00000622960 CLEC4EQ9ULY5 219 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms