RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 MAB21L3Q8N8X9 362 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 IPMKQ8NFU5 416 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 CPT1BQ92523 772 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 ATP2A3Q93084 1043 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 ADAM7Q9H2U9 754 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 MARCH5Q9NX47 278 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 TPX2Q9ULW0 747 aaKnown RBP10.87□□□□□ -0.67
VPS11-208ENST00000621676 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.87□□□□□ -0.67
VPS11-208ENST00000621676 A0A1W2PPM1 405 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 TP73O15350 636 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 TLR5O60602 858 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 SEC24AO95486 1093 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 VIMP08670 466 aaKnown RBP10.87□□□□□ -0.67
VPS11-208ENST00000621676 CLTBP09497 229 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 RARGP13631 454 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 NR1D1P20393 614 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 CHRNA4P43681 627 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 SEPT6Q14141 434 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 SCD5Q86SK9 330 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 CMASQ8NFW8 434 aaPredicted RBP10.87□□□□□ -0.67
VPS11-208ENST00000621676 SUSD3Q96L08 255 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 ACBD6Q9BR61 282 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 HCFC1R1Q9NWW0 138 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 NINJ2Q9NZG7 142 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 DERAQ9Y315 318 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 FRYLO94915 3013 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 SCN5AQ14524 2016 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 VAV1P15498 845 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 IVDP26440 423 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 CCT5P48643 541 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 ALFQ53S48 1182 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 ARHGAP17Q68EM7 881 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 ZNF280DQ6N043 979 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 TRMT10BQ6PF06 316 aaKnown RBP10.87□□□□□ -0.67
VPS11-208ENST00000621676 CHSY1Q86X52 802 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 NPAS4Q8IUM7 802 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 SPATA6LQ8N4H0 392 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 BCAS4Q8TDM0 211 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 WBP2Q969T9 261 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 P2RY11Q96G91 374 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 FAM161BQ96MY7 647 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 BRD8Q9H0E9 1235 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 DDX56Q9NY93 547 aaKnown RBP10.87□□□□□ -0.67
VPS11-208ENST00000621676 PCYOX1Q9UHG3 505 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 PCDHB5Q9Y5E4 795 aa10.87□□□□□ -0.67
VPS11-208ENST00000621676 RNF103O00237 685 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 RIPK2O43353 540 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 MYL4P12829 197 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 RPL9P32969 192 aaKnown RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 RDXP35241 583 aaKnown RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 HADHBP55084 474 aaKnown RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 NTHL1P78549 312 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 PTPRCAPQ14761 206 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 MROH9Q5TGP6 573 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 OTUD1Q5VV17 481 aaPredicted RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 PRPF39Q86UA1 669 aaKnown RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 ALLCQ8N6M5 410 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 COLGALT1Q8NBJ5 622 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 AGR3Q8TD06 166 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 GRK7Q8WTQ7 553 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 HSFY1Q96LI6 401 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 PAK6Q9NQU5 681 aaPredicted RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 OPA1O60313 960 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 DNAJC6O75061 913 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 YWHAQP27348 245 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 CST5P28325 142 aaPredicted RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 POU6F1Q14863 301 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 XKR4Q5GH76 650 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 RFX8Q6ZV50 586 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 BBS12Q6ZW61 710 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 ARL14EPQ8N8R7 260 aaPredicted RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 OR52K1Q8NGK4 314 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 SPOCK2Q92563 424 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 ARHGEF2Q92974 986 aaKnown RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 MARCH2Q9P0N8 246 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 PHF24Q9UPV7 400 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 MTMR11A4FU01 709 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 FAM187AA6NFU0 413 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 CCDC85CA6NKD9 419 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 APOC4-APOC2K7ER74 178 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 CCL16O15467 120 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 CAPN15O75808 1086 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 APOC2P02655 101 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 GLDCP23378 1020 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 ERFP50548 548 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 CDK7P50613 346 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 TFDP2Q14188 446 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 LRRC73Q5JTD7 316 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 NCBP2-AS2Q69YL0 99 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 C4orf50Q6ZRC1 276 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 MRPL10Q7Z7H8 261 aaKnown RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 LDB1Q86U70 411 aaPredicted RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 FBF1Q8TES7 1133 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 ZNF778Q96MU6 729 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 ABCG8Q9H221 673 aa10.86□□□□□ -0.67
VPS11-208ENST00000621676 PABPC3Q9H361 631 aaKnown RBP10.86□□□□□ -0.67
VPS11-208ENST00000621676 SF3B1O75533 1304 aaKnown RBP eCLIP10.85□□□□□ -0.67
VPS11-208ENST00000621676 CCDC195A0A1B0GUA6 201 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms