RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	DBF4	Q9UBU7	674 aa	Predicted RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	NARF	Q9UHQ1	456 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CDC23	Q9UJX2	597 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MINPP1	Q9UNW1	487 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	NAALAD2	Q9Y3Q0	740 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PCDHGA1	Q9Y5H4	931 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	KIF24	Q5T7B8	1368 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836		A0A088AWK7	358 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	NOTO	A8MTQ0	251 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PTP4A3	O75365	173 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DNAJB5	O75953	348 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	C6	P13671	934 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PCSK2	P16519	638 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ALDH4A1	P30038	563 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RGS2	P41220	211 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ST5	P78524	1137 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	NRG1	Q02297	640 aa	Predicted RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DNAJC3	Q13217	504 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	BLMH	Q13867	455 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	KRT31	Q15323	416 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	UGP2	Q16851	508 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MSS51	Q4VC12	460 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	HSP90AA4P	Q58FG1	418 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TTMP	Q5BVD1	217 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	KIAA1161	Q6NSJ0	714 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PIK3AP1	Q6ZUJ8	805 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	UTS2B	Q765I0	119 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	LRRTM4	Q86VH4	590 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	LAPTM4B	Q86VI4	370 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PM20D2	Q8IYS1	436 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	HDDC3	Q8N4P3	179 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CNNM3	Q8NE01	707 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SLC35G2	Q8TBE7	412 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ASZ1	Q8WWH4	475 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	LIPH	Q8WWY8	451 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	KIAA1191	Q96A73	305 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SHISA4	Q96DD7	197 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TESK2	Q96S53	571 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PRRX2	Q99811	253 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SNX25	Q9H3E2	840 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CENPH	Q9H3R5	247 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ARFGAP3	Q9NP61	516 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RCOR3	Q9P2K3	495 aa	Predicted RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZNHIT2	Q9UHR6	403 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RWDD3	Q9Y3V2	267 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ACE	P12821	1306 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FRMPD4	Q14CM0	1322 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	COL4A4	P53420	1690 aa	Predicted RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MIF4GD	A9UHW6	222 aa	Known RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FANCG	O15287	622 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	OXSR1	O95747	527 aa	Predicted RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	EIF2S2	P20042	333 aa	Known RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RAD23A	P54725	363 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RAB14	P61106	215 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RPP30	P78346	268 aa	Known RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ATP8B2	P98198	1209 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZNF33B	Q06732	778 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PLD1	Q13393	1074 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	XRCC4	Q13426	336 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CAMK2D	Q13557	499 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SEMA5A	Q13591	1074 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ARID5B	Q14865	1188 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PFKFB4	Q16877	469 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TOR1AIP1	Q5JTV8	583 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	C1orf141	Q5JVX7	400 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CCNJ	Q5T5M9	372 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DUPD1	Q68J44	220 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RABEPK	Q7Z6M1	372 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CACNA2D3	Q8IZS8	1091 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	EXOC6	Q8TAG9	804 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZNF566	Q969W8	418 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TSNARE1	Q96NA8	513 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RIT2	Q99578	217 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SYNDIG1	Q9H7V2	258 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SNTG1	Q9NSN8	517 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SLC35D1	Q9NTN3	355 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MRPL39	Q9NYK5	338 aa	Known RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	VPS54	Q9P1Q0	977 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	USP36	Q9P275	1121 aa	Known RBP	4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CFAP97	Q9P2B7	532 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	STK17A	Q9UEE5	414 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RPS6KA6	Q9UK32	745 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PPT2	Q9UMR5	302 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	STK38L	Q9Y2H1	464 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	LTBP3	Q9NS15	1303 aa		4.22	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ITGB4	P16144	1822 aa		4.21	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CCDC151	A5D8V7	595 aa		4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	HGS	O14964	777 aa	Predicted RBP	4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	BET1	O15155	118 aa		4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PI15	O43692	258 aa		4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	LILRA1	O75019	489 aa		4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PHF2	O75151	1096 aa		4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SURF6	O75683	361 aa	Known RBP	4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MLYCD	O95822	493 aa		4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	LMNA	P02545	664 aa	Known RBP	4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	IL6	P05231	212 aa		4.21	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CYP3A5	P20815	502 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms