RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 COG7P83436 770 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SEMG2Q02383 582 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CLPPQ16740 277 aaPredicted RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 ME3Q16798 604 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 GEN1Q17RS7 908 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 MARCH9Q86YJ5 346 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 MYCT1Q8N699 235 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 POMGNT1Q8WZA1 660 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 WBP2Q969T9 261 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SYAP1Q96A49 352 aaPredicted RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 SGF29Q96ES7 293 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 C8orf76Q96K31 380 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SLC46A1Q96NT5 459 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ZNF518BQ9C0D4 1074 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 DNAI2Q9GZS0 605 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CPNE5Q9HCH3 593 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 PREBQ9HCU5 417 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 OLA1Q9NTK5 396 aaKnown RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 TMEM30AQ9NV96 361 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 MAN2B2Q9Y2E5 1009 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 HBS1LQ9Y450 684 aaKnown RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 U3KQA8 63 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 TOR1BO14657 336 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 TPP1O14773 563 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ATP2C2O75185 946 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 C5AR1P21730 350 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 LMO2P25791 158 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ACSL1P33121 698 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 AFMP43652 599 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CYP27A1Q02318 531 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SPATS2Q86XZ4 545 aaKnown RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 FAM26EQ8N5C1 309 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 EID2Q8N6I1 236 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 NAT16Q8N8M0 369 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SPATA20Q8TB22 786 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ZNF564Q8TBZ8 553 aaPredicted RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 CALML4Q96GE6 196 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SLC6A18Q96N87 628 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 MRPL45Q9BRJ2 306 aaKnown RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 FUCA2Q9BTY2 467 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SMPD4Q9NXE4 827 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 HSPBP1Q9NZL4 362 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SALL4Q9UJQ4 1053 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ANAPC2Q9UJX6 822 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ASPMQ8IZT6 3477 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 LAMA1P25391 3075 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ANKRD11Q6UB99 2663 aaPredicted RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 HELZ2Q9BYK8 2649 aaKnown RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 CCDC187A0A096LP49 1063 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CXorf51AA0A1B0GTR3 108 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 GOLGA8CPA6NN73 597 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SFI1A8K8P3 1242 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 PLRG1O43660 514 aaKnown RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 CSO75390 466 aaKnown RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 GIMD1P0DJR0 217 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 PLCG1P19174 1290 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 WASP42768 502 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 TFAMQ00059 246 aaKnown RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 INCA1Q0VD86 236 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ISXQ2M1V0 245 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CCDC81Q6ZN84 652 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SND1Q7KZF4 910 aaKnown RBP eCLIP4.8□□□□□ -1.64
SNCA-213ENST00000618500 ADIPOR2Q86V24 386 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ZMIZ2Q8NF64 920 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ASB12Q8WXK4 309 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CDK5RAP3Q96JB5 506 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CCNL2Q96S94 520 aaPredicted RBP4.8□□□□□ -1.64
SNCA-213ENST00000618500 TRIM9Q9C026 710 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 MTMR12Q9C0I1 747 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 XYLT2Q9H1B5 865 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ZDHHC4Q9NPG8 344 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CYTH4Q9UIA0 394 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SLCO1B1Q9Y6L6 691 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 BPTFQ12830 3046 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 GJB6O95452 261 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 IGLV3-27P01718 113 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 TRIM21P19474 475 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 HOXD9P28356 352 aaPredicted RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 RBMS1P29558 406 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 PSMC1P62191 440 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 DNAJC3Q13217 504 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 RAB41Q5JT25 222 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 ARHGAP40Q5TG30 622 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 TMEM215Q68D42 235 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 STXBP4Q6ZWJ1 553 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 ADAT2Q7Z6V5 191 aaKnown RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 CCDC117Q8IWD4 279 aaPredicted RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 PLPP6Q8IY26 295 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 SDR16C5Q8N3Y7 309 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 ARL14Q8N4G2 192 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 TTC39CQ8N584 583 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 P2RY11Q96G91 374 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 MYO19Q96H55 970 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 ZSCAN31Q96LW9 406 aaPredicted RBP4.79□□□□□ -1.64
SNCA-213ENST00000618500 SMOQ99835 787 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 FAM213AQ9BRX8 229 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 WDFY3Q8IZQ1 3526 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 NPHP3-ACAD11A0A0J9YXS1 232 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 EDDM13A0A1B0GTR0 161 aa4.79□□□□□ -1.64
SNCA-213ENST00000618500 ZNF233A6NK53 670 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms