RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CEP41Q9BYV8 373 aa17.89■□□□□ 0.46
PCDHGC3-205ENST00000617641 GPR62Q9BZJ7 368 aa17.89■□□□□ 0.46
PCDHGC3-205ENST00000617641 SEPT10Q9P0V9 454 aa17.89■□□□□ 0.46
PCDHGC3-205ENST00000617641 LRFN2Q9ULH4 789 aa17.89■□□□□ 0.46
PCDHGC3-205ENST00000617641 TTC3P53804 2025 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 SCN5AQ14524 2016 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 A0A0A0MRY4 1105 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 RASA4BC9J798 803 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 RNF103O00237 685 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 RASA4O43374 803 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 FAM107AO95990 144 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 BTBD8Q5XKL5 378 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 SCD5Q86SK9 330 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 SPATA13Q96N96 652 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 SEZ6LQ9BYH1 1024 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 ACSS3Q9H6R3 686 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 OR12D3Q9UGF7 316 aa17.89■□□□□ 0.45
PCDHGC3-205ENST00000617641 SYN3O14994 580 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 IGLV3-25P01717 112 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 IFNAR2P48551 515 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 SLC11A1P49279 550 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 GEMIN4P57678 1058 aaKnown RBP17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 MPP2Q14168 576 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 LRRC14Q15048 493 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 PKN2Q16513 984 aaKnown RBP17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 DDR2Q16832 855 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 CTXN3Q4LDR2 81 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 NPWQ8N729 165 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 ANKRD42Q8N9B4 389 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 PRMT1Q99873 361 aaKnown RBP17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 TRIM62Q9BVG3 475 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 ABCC13Q9NSE7 274 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 SLC24A2Q9UI40 661 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 NUDT5Q9UKK9 219 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 MYO16Q9Y6X6 1858 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 PPP1R12AO14974 1030 aaPredicted RBP17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 PBX3P40426 434 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 HCAR3P49019 387 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 GLUD2P49448 558 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 CCL23P55773 120 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 BEND5Q7L4P6 421 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 TRABD2AQ86V40 505 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 TTC9BQ8N6N2 239 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 CFAP36Q96G28 342 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 EPAS1Q99814 870 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 FRMD8Q9BZ67 464 aaPredicted RBP17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 NMUR1Q9HB89 426 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 MLXIPLQ9NP71 852 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 MARCH5Q9NX47 278 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 PSMC3IPQ9P2W1 217 aaPredicted RBP17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 SFMBT1Q9UHJ3 866 aa17.88■□□□□ 0.45
PCDHGC3-205ENST00000617641 A0A1W2PQH9 124 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 IRAK2O43187 625 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 MSI1O43347 362 aaKnown RBP17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 LRIG2O94898 1065 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 TSHRP16473 764 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 ATP2A2P16615 1042 aaKnown RBP17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 TPSB2P20231 275 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 SEMA5AQ13591 1074 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 TPSAB1Q15661 275 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 NFE2Q16621 373 aaPredicted RBP17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 ZNF534Q76KX8 674 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 MCUQ8NE86 351 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 CASP10Q92851 521 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 RNF208Q9H0X6 261 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 NT5C1B-RDH14C9J2C7 533 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 ALDH2P05091 517 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 KRT15P19012 456 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 EPHB2P29323 1055 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 GRIA1P42261 906 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 ARPP19P56211 112 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 WASHC5Q12768 1159 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 EIF4EBP2Q13542 120 aaPredicted RBP17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 QPCTQ16769 361 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 KLHL38Q2WGJ6 581 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 COLGALT1Q8NBJ5 622 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 ATAD1Q8NBU5 361 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 ZNF784Q8NCA9 323 aaPredicted RBP17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 FUBP3Q96I24 572 aaKnown RBP eCLIP17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 PAFAH2Q99487 392 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 PPCSQ9HAB8 311 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 KIF9Q9HAQ2 790 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 ACTL7BQ9Y614 415 aa17.87■□□□□ 0.45
PCDHGC3-205ENST00000617641 TCRBV9S1A1TA0A576 114 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 STK10O94804 968 aaKnown RBP17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 CCL5P13501 91 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 CBLBQ13191 982 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 MRPL58Q14197 206 aaKnown RBP17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 PDZD4Q76G19 769 aaPredicted RBP17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 CRIPAKQ8N1N5 446 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 APBB2Q92870 758 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 PPP1R12CQ9BZL4 782 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 SIK2Q9H0K1 926 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 SMOC2Q9H3U7 446 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 OSER1Q9NX31 292 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 OGDHLQ9ULD0 1010 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 PCDHB5Q9Y5E4 795 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 TBKBP1A7MCY6 615 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 KCNK1O00180 336 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms