RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CSNK1G1Q9HCP0 422 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 RMND1Q9NWS8 449 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 PCOLCE2Q9UKZ9 415 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 KNTC1P50748 2209 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 A0A1B0GTW7 788 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 FAM149AA5PLN7 773 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 PRRT4C9JH25 899 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 TIMM44O43615 452 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 CBFA2T3O75081 653 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 ZNF202O95125 648 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 ATXN1LP0C7T5 689 aaKnown RBP8.97□□□□□ -0.97
GPC6-202ENST00000617456 ZDHHC11BP0C7U3 371 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 MYBL2P10244 700 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 NCAM1P13591 858 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 TYRP14679 529 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 CASP1P29466 404 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 CD6P30203 668 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 NDUFA8P51970 172 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 SLC5A3P53794 718 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 NUCB2P80303 420 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 INCA1Q0VD86 236 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 BIRC3Q13489 604 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 TBC1D25Q3MII6 688 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 TTC31Q49AM3 519 aaPredicted RBP8.97□□□□□ -0.97
GPC6-202ENST00000617456 FOXR2Q6PJQ5 311 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 LEKR1Q6ZMV7 388 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 SV2AQ7L0J3 742 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 CCDC150Q8NCX0 1101 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 SMARCD1Q96GM5 515 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 GSDMAQ96QA5 445 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 XPO6Q96QU8 1125 aaKnown RBP8.97□□□□□ -0.97
GPC6-202ENST00000617456 GABRG3Q99928 467 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 GPR174Q9BXC1 333 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 ZDHHC5Q9C0B5 715 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 CD248Q9HCU0 757 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 DMAP1Q9NPF5 467 aaPredicted RBP8.97□□□□□ -0.97
GPC6-202ENST00000617456 IRAK4Q9NWZ3 460 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 NXF1Q9UBU9 619 aaKnown RBP8.97□□□□□ -0.97
GPC6-202ENST00000617456 HOOK1Q9UJC3 728 aaKnown RBP8.97□□□□□ -0.97
GPC6-202ENST00000617456 FNDC3AQ9Y2H6 1198 aaKnown RBP8.97□□□□□ -0.97
GPC6-202ENST00000617456 STARD13Q9Y3M8 1113 aa8.97□□□□□ -0.97
GPC6-202ENST00000617456 BICDL2A1A5D9 508 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 TRABD2BA6NFA1 517 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 TMCO5BA8MYB1 307 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 CILPO75339 1184 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 VNN1O95497 513 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 CER1O95813 267 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 TBX18O95935 607 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 PRB1P04280 392 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 KRT13P13646 458 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 NR2F2P24468 414 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 PPP1R2P41236 205 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 MATKP42679 507 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 DGKGP49619 791 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 PGFP49763 221 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 VAMP7P51809 220 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 RPS6KA3P51812 740 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 ADAM9Q13443 819 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 ZCWPW2Q504Y3 356 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 DCAF12L1Q5VU92 463 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 KLHDC10Q6PID8 442 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 MMS22LQ6ZRQ5 1243 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 TMPRSS7Q7RTY8 843 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 GLRX5Q86SX6 157 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 FAM35AQ86V20 835 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 CACUL1Q86Y37 369 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 SPATA20Q8TB22 786 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 ADAM32Q8TC27 787 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 PLEKHO2Q8TD55 490 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 RHBDD1Q8TEB9 315 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 SNX19Q92543 992 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 MIEF2Q96C03 454 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 DCBLD2Q96PD2 775 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 HNRNPABQ99729 332 aaKnown RBP8.96□□□□□ -0.98
GPC6-202ENST00000617456 UBXN6Q9BZV1 441 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 SMYD3Q9H7B4 428 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 RMI1Q9H9A7 625 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 SCUBE2Q9NQ36 999 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 TM7SF3Q9NS93 570 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 PLK2Q9NYY3 685 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.96□□□□□ -0.98
GPC6-202ENST00000617456 TPX2Q9ULW0 747 aaKnown RBP8.96□□□□□ -0.98
GPC6-202ENST00000617456 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.96□□□□□ -0.98
GPC6-202ENST00000617456 STON1Q9Y6Q2 735 aa8.96□□□□□ -0.98
GPC6-202ENST00000617456 A0A1B0GVT2 93 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 BCAT2O15382 392 aaPredicted RBP8.95□□□□□ -0.98
GPC6-202ENST00000617456 CACNG3O60359 315 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 TLR5O60602 858 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 AP1G2O75843 785 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 CASP4P49662 377 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 CDH8P55286 799 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 BNC1Q01954 994 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 STARD3Q14849 445 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 HLA-BQ31612 363 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 FUT11Q495W5 492 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 C1orf220Q5T0J3 134 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 KRT39Q6A163 491 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 SCARA5Q6ZMJ2 495 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 PAQR9Q6ZVX9 377 aa8.95□□□□□ -0.98
GPC6-202ENST00000617456 TADA2BQ86TJ2 420 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms