RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 DCLK1O15075 740 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 TMEM63AO94886 807 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 FSBPO95073 299 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 ACSL3O95573 720 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 FASTKD3Q14CZ7 662 aaKnown RBP21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 MGAT5BQ3V5L5 792 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 DENND2CQ68D51 928 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 FBXO22Q8NEZ5 403 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 RBM15Q96T37 977 aaKnown RBP eCLIP21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 SEPT5Q99719 369 aaPredicted RBP21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 SMOC2Q9H3U7 446 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 NINJ2Q9NZG7 142 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 BANF1O75531 89 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 ZFXP17010 805 aaPredicted RBP21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 NR2C2P49116 596 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 GTF2A1P52655 376 aaPredicted RBP21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 PKN2Q16513 984 aaKnown RBP21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 HP1BP3Q5SSJ5 553 aaPredicted RBP21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 SYCP2LQ5T4T6 812 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 NECAB2Q7Z6G3 386 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 CNPY4Q8N129 248 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 LGMNQ99538 433 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 SHOC2Q9UQ13 582 aa21.3■■□□□ 1
CNTNAP3B-212ENST00000617422 FAM92AA1XBS5 289 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 H7C4K7 107 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 C2CD2LO14523 706 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 HAPLN1P10915 354 aaPredicted RBP21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 VAV1P15498 845 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 USP41Q3LFD5 358 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 SLC45A4Q5BKX6 768 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 TRMT10CQ7L0Y3 403 aaKnown RBP21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 MON1AQ86VX9 555 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 C9orf72Q96LT7 481 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 QKIQ96PU8 341 aaKnown RBP eCLIP21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 MTRRQ9UBK8 725 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 OR12D3Q9UGF7 316 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 XPO7Q9UIA9 1087 aaKnown RBP21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 MRPL42Q9Y6G3 142 aaKnown RBP21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 TTC4O95801 387 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 RAG1P15918 1043 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 ERCC2P18074 760 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 ATF6P18850 670 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 MTM1Q13496 603 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 SLC8B1Q6J4K2 584 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 MFSD5Q6N075 450 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 DENND5BQ6ZUT9 1274 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 NPWQ8N729 165 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 CCDC110Q8TBZ0 833 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 SPPL2BQ8TCT7 592 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 ARHGEF38Q9NXL2 777 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 NEU3Q9UQ49 428 aa21.29■■□□□ 1
CNTNAP3B-212ENST00000617422 LRIG2O94898 1065 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 OR1D2P34982 312 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 XRCC4Q13426 336 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 PSMD5Q16401 504 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 MSS51Q4VC12 460 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 FAXCQ5TGI0 409 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 C16orf59Q7L2K0 433 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 RELL1Q8IUW5 271 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 PPIL6Q8IXY8 311 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 CENPHQ9H3R5 247 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 FBXO44Q9H4M3 255 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 NUP205Q92621 2012 aa21.28■■□□□ 1
CNTNAP3B-212ENST00000617422 TBX18O95935 607 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 HPDP32754 393 aaPredicted RBP21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 TPI1P60174 286 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 BASP1P80723 227 aaKnown RBP21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 PAFAH1B3Q15102 231 aaKnown RBP21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 ARL13BQ3SXY8 428 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 FNBP1LQ5T0N5 605 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 RASIP1Q5U651 963 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 SLC39A11Q8N1S5 342 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 GIPC2Q8TF65 315 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 RNF34Q969K3 372 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 CLSTN3Q9BQT9 956 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 WDR83Q9BRX9 315 aaKnown RBP21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 TRIM62Q9BVG3 475 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 SAYSD1Q9NPB0 183 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 E7EVH7 732 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 MAGEA4P43358 317 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 TAF10Q12962 218 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 KRT71Q3SY84 523 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 SPOUT1Q5T280 376 aaKnown RBP21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 OTOP2Q7RTS6 562 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 CDKL3Q8IVW4 592 aaPredicted RBP21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 SLC12A6Q9UHW9 1150 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 CAPN7Q9Y6W3 813 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 KIAA1671Q9BY89 1806 aa21.27■■□□□ 1
CNTNAP3B-212ENST00000617422 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 YWHAQP27348 245 aa21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 HCAR3P49019 387 aa21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 EIF3BP55884 814 aaKnown RBP21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 IFFO1Q0D2I5 559 aa21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 KCNJ11Q14654 390 aa21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 EPS8L3Q8TE67 593 aaKnown RBP21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 CFAP69A5D8W1 941 aa21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 GMNCA6NCL1 334 aa21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 PAGE1O75459 146 aa21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 HNRNPH1P31943 449 aaKnown RBP21.26■□□□□ 0.99
CNTNAP3B-212ENST00000617422 SEC24CP53992 1094 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms