RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 CDH9Q9ULB4 789 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 KLHL2O95198 593 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 PDHA1P08559 390 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 ZBTB48P10074 688 aaPredicted RBP13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 ERVK-10P10266 1014 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 GFAPP14136 432 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 PGAM1P18669 254 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 KCNA4P22459 653 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 ABCG1P45844 678 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 SERPINB8P50452 374 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 LILRA4P59901 499 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 TSTA3Q13630 321 aaPredicted RBP13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 HABP4Q5JVS0 413 aaKnown RBP13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 C16orf46Q6P387 395 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 ZCCHC23Q6ZST2 131 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 MCRS1Q96EZ8 462 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 CSPG4P5Q96PW8 444 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 CHST12Q9NRB3 414 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 PPEF2O14830 753 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 SNX2O60749 519 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 RALBP11234 206 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 CPA3P15088 417 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 ALDH7A1P49419 539 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 HARS2P49590 506 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 FLT3LGP49771 235 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 SLC25A52Q3SY17 297 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 FAM171A1Q5VUB5 890 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 FAM35AQ86V20 835 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 GLIS1Q8NBF1 620 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 TEKT4Q8WW24 435 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 TRPV6Q9H1D0 765 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 ADA2Q9NZK5 511 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 GGA2Q9UJY4 613 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 ZBBXA8MT70 800 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 PRRG1O14668 218 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 ALDH2P05091 517 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 PPARGP37231 505 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 NRLP54845 237 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 CDK16Q00536 496 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 CDH17Q12864 832 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 SLC26A9Q7LBE3 791 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 BLOC1S5Q8TDH9 187 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 BHMTQ93088 406 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 TMEM237Q96Q45 408 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 SDCBP2Q9H190 292 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 Q9H521 79 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 ZC3H4Q9UPT8 1303 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 MYH7BA7E2Y1 1941 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 TULP2O00295 520 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 SMIM24O75264 130 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 ATXN1P54253 815 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 AP2B1P63010 937 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 TCEAL1Q15170 157 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 RASA2Q15283 850 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 ZNF280DQ6N043 979 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 DRICH1Q6PGQ1 229 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 STRADAQ7RTN6 431 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 MYLPFQ96A32 169 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 MYCBPQ99417 103 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 EBNA1BP2Q99848 306 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 MUC3BQ9H195 1237 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 TRHDEQ9UKU6 1024 aa13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 RUVBL2Q9Y230 463 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-206ENST00000616407 IGKV6D-21A0A0A0MT36 114 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 CBX6O95503 412 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 CCL14Q16627 93 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 PDK4Q16654 411 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 DNAL1Q4LDG9 190 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 SLCO2A1Q92959 643 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 TSPAN17Q96FV3 270 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 MYLK2Q9H1R3 596 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 ITGA9Q13797 1035 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 FUKQ8N0W3 1084 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 CLEC4CQ8WTT0 213 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 P2RY11Q96G91 374 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 UNKQ9C0B0 810 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 AIM2O14862 343 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 SH3BP5O60239 455 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 ALDH1A1P00352 501 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 SERPINB3P29508 390 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 RBBP5Q15291 538 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 SOWAHAQ2M3V2 549 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 ZNF792Q3KQV3 632 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 RABGAP1LQ5R372 815 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 CYP4X1Q8N118 509 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 PYROXD2Q8N2H3 581 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 STKLD1Q8NE28 680 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 NPLOC4Q8TAT6 608 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 SH3TC2Q8TF17 1288 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 FAXDC2Q96IV6 333 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 ILKAPQ9H0C8 392 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 NDE1Q9NXR1 346 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 GRIN2DO15399 1336 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms