RNA–Protein interactions for RNA: ENST00000616140.1

CPSF1-212, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-212ENST00000616140 MZF1P28698 734 aaPredicted RBP14.34□□□□□ -0.11
CPSF1-212ENST00000616140 RENBPP51606 427 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 CRADDP78560 199 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 POLD3Q15054 466 aaPredicted RBP14.34□□□□□ -0.11
CPSF1-212ENST00000616140 GRTP1Q5TC63 336 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 LRRC38Q5VT99 294 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 FKBP1CQ5VVH2 108 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 MIER2Q8N344 545 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 ANKRD27Q96NW4 1050 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 RNPEPL1Q9HAU8 725 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 ADARB2Q9NS39 739 aaKnown RBP14.34□□□□□ -0.11
CPSF1-212ENST00000616140 RHBDL2Q9NX52 303 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 SAC3D1A6NKF1 404 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 PHGDHO43175 533 aaKnown RBP14.34□□□□□ -0.11
CPSF1-212ENST00000616140 NPNTQ6UXI9 565 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 PPP2R3CQ969Q6 453 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 CDRT15Q96T59 188 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 NEUROG2Q9H2A3 272 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 NMRAL1Q9HBL8 299 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 CCDC167Q9P0B6 97 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 CDV3Q9UKY7 258 aaKnown RBP14.34□□□□□ -0.11
CPSF1-212ENST00000616140 TRDMT1O14717 391 aaKnown RBP14.34□□□□□ -0.11
CPSF1-212ENST00000616140 FSCN2O14926 492 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 KRT8P05787 483 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 ATP6V1B2P21281 511 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 CDC25CP30307 473 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 RGS2P41220 211 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 NAGLUP54802 743 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 TBCELQ5QJ74 424 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 ANKS3Q6ZW76 656 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 RNF180Q86T96 592 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 FHDC1Q9C0D6 1143 aaPredicted RBP14.34□□□□□ -0.11
CPSF1-212ENST00000616140 VPS28Q9UK41 221 aa14.34□□□□□ -0.11
CPSF1-212ENST00000616140 PAIP2BQ9ULR5 123 aaKnown RBP14.34□□□□□ -0.11
CPSF1-212ENST00000616140 TBC1D12O60347 775 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 MPOP05164 745 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 FGRP09769 529 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 ERVK-10P10266 1014 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 DRD4P21917 467 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 CYP51A1Q16850 503 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 KYAT3Q6YP21 454 aaKnown RBP14.33□□□□□ -0.11
CPSF1-212ENST00000616140 RIPOR1Q6ZS17 1223 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 C15orf52Q6ZUT6 534 aaKnown RBP14.33□□□□□ -0.11
CPSF1-212ENST00000616140 NUDT18Q6ZVK8 323 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 LRRC8DQ7L1W4 858 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 PIWIL2Q8TC59 973 aaKnown RBP14.33□□□□□ -0.11
CPSF1-212ENST00000616140 SEPHS2Q99611 448 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 TBC1D10AQ9BXI6 508 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 SYNPO2Q9UMS6 1093 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 PCDHB7Q9Y5E2 793 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 UBIAD1Q9Y5Z9 338 aa14.33□□□□□ -0.11
CPSF1-212ENST00000616140 FAM95CA0A1B0GW59 222 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 TUBP50607 506 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 NOMO3P69849 1222 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 BMT2Q1RMZ1 405 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 OTUD3Q5T2D3 398 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-212ENST00000616140 SLC44A2Q8IWA5 706 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-212ENST00000616140 MYO1HQ8N1T3 1032 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 ETNK2Q9NVF9 386 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 TBC1D13Q9NVG8 400 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 TRHDEQ9UKU6 1024 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 STARD13Q9Y3M8 1113 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 ACTL7BQ9Y614 415 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 FAM237BA0A1B0GVD1 139 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 SRRM3A6NNA2 597 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-212ENST00000616140 RAMP2O60895 175 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 RECQL4O94761 1208 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 CCDC130P13994 396 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 ITGALP20701 1170 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 ME2P23368 584 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 PWP1Q13610 501 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 ADRM1Q16186 407 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 HGSNATQ68CP4 663 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 FOXR2Q6PJQ5 311 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 CYP2R1Q6VVX0 501 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 SLC22A9Q8IVM8 553 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 ART4Q93070 314 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 OPTNQ96CV9 577 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 ACTR8Q9H981 624 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 CPA4Q9UI42 421 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 F8W810 466 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 INPP4BO15327 924 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 BANF1O75531 89 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 PIGNO95427 931 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 FLT3P36888 993 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 TMED10P49755 219 aaKnown RBP14.33□□□□□ -0.12
CPSF1-212ENST00000616140 PPP4R4Q6NUP7 873 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 GDPD5Q8WTR4 605 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 CPNE1Q99829 537 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 TMEM79Q9BSE2 394 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 RRN3Q9NYV6 651 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 IL1RAPL1Q9NZN1 696 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 DSEQ9UL01 958 aa14.33□□□□□ -0.12
CPSF1-212ENST00000616140 DDNO94850 711 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-212ENST00000616140 RHOCP08134 193 aa14.32□□□□□ -0.12
CPSF1-212ENST00000616140 BBS12Q6ZW61 710 aa14.32□□□□□ -0.12
CPSF1-212ENST00000616140 TBC1D19Q8N5T2 526 aa14.32□□□□□ -0.12
CPSF1-212ENST00000616140 ULBP1Q9BZM6 244 aa14.32□□□□□ -0.12
CPSF1-212ENST00000616140 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms