RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.9□□□□□ -1.78
LTN1-207ENST00000614971 ZMYM5Q9UJ78 669 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 TRPV2Q9Y5S1 764 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 CACNA1FO60840 1977 aa3.9□□□□□ -1.78
LTN1-207ENST00000614971 MAP3K7O43318 606 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 PSTPIP1O43586 416 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 KDELR1P24390 212 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 MAP4P27816 1152 aaKnown RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 CD86P42081 329 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 NUDT2P50583 147 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 OAZ1P54368 228 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 NOMO3P69849 1222 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 CDC42EP1Q00587 391 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 SLC6A3Q01959 620 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 OLIG2Q13516 323 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 GALNT3Q14435 633 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 KYAT1Q16773 422 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 FAM83EQ2M2I3 478 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 AP5B1Q2VPB7 878 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 PLPP4Q5VZY2 271 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 HGSNATQ68CP4 663 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 CMC1Q7Z7K0 106 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 DBF4BQ8NFT6 615 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 WDR48Q8TAF3 677 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 ACTRT1Q8TDG2 376 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 SPOCK2Q92563 424 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 OSBPL1AQ9BXW6 950 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 NINJ2Q9NZG7 142 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 PCDHA3Q9Y5H8 950 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 A0A0B4J269 797 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 A0A1W2PQ67 120 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 ARHGAP10A1A4S6 786 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 SDR42E2A6NKP2 422 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 C9JVG2 144 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 RIPK2O43353 540 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 TBC1D12O60347 775 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 UBOX5O94941 541 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 NPR3P17342 541 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 CYP2C18P33260 490 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 ABL2P42684 1182 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 OXCT1P55809 520 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 PHEXP78562 749 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 MRPS6P82932 125 aaKnown RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 MPP3Q13368 585 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 POLD3Q15054 466 aaPredicted RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 SPRYD7Q5W111 196 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 PRSS55Q6UWB4 352 aaPredicted RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 ELOA2Q8IYF1 753 aaPredicted RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 CALR3Q96L12 384 aaKnown RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 ELOVL4Q9GZR5 314 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 ASB7Q9H672 318 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 XAB2Q9HCS7 855 aaKnown RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 DONSONQ9NYP3 566 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 SLC17A6Q9P2U8 582 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 SPASTQ9UBP0 616 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 PCDHB5Q9Y5E4 795 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 KIF13AQ9H1H9 1805 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 GTPBP10A4D1E9 387 aaKnown RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 EME2A4GXA9 379 aaPredicted RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 MYO1GB0I1T2 1018 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 SMNDC1O75940 238 aaKnown RBP eCLIP3.9□□□□□ -1.79
LTN1-207ENST00000614971 ABCB1P08183 1280 aaPredicted RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 ERCC2P18074 760 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 HDCP19113 662 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 LHX1P48742 406 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 C1QBPQ07021 282 aaKnown RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 TRIM32Q13049 653 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 DUSP28Q4G0W2 176 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 TCHHL1Q5QJ38 904 aaPredicted RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 NAPEPLDQ6IQ20 393 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 TTC23LQ6PF05 361 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 NAPRTQ6XQN6 538 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 SRLQ86TD4 932 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 ZNF366Q8N895 744 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 ATP6V0D2Q8N8Y2 350 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 MED8Q96G25 268 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 SMARCD1Q96GM5 515 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 RPL10LQ96L21 214 aaKnown RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 UPF3AQ9H1J1 476 aaKnown RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 HIPK3Q9H422 1215 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 ZDHHC4Q9NPG8 344 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 SCUBE2Q9NQ36 999 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 FBXO6Q9NRD1 293 aaPredicted RBP3.9□□□□□ -1.79
LTN1-207ENST00000614971 DOLKQ9UPQ8 538 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 ARL2BPQ9Y2Y0 163 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 CNTNAP1P78357 1384 aa3.9□□□□□ -1.79
LTN1-207ENST00000614971 PDE5AO76074 875 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 BAIAP3O94812 1187 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 HIST1H2AGP0C0S8 130 aaPredicted RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 RARGP13631 454 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 ATP6V1B1P15313 513 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 CREB1P16220 341 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 HIST1H2ADP20671 130 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 NFKBIAP25963 317 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 STIP1P31948 543 aaKnown RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 RPA3P35244 121 aaPredicted RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 GATMP50440 423 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 N4BP2L1Q5TBK1 243 aaPredicted RBP3.89□□□□□ -1.79
LTN1-207ENST00000614971 FAM124AQ86V42 546 aa3.89□□□□□ -1.79
LTN1-207ENST00000614971 ZNF614Q8N883 585 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms