RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 CEP68Q76N32 757 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 KBTBD6Q86V97 674 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 ERICH1Q86X53 443 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 FAM160A2Q8N612 972 aaPredicted RBP16.28■□□□□ 0.2
PDCD6-212ENST00000614778 ZNF397Q8NF99 534 aaPredicted RBP16.28■□□□□ 0.2
PDCD6-212ENST00000614778 SORCS1Q8WY21 1168 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 C18orf8Q96DM3 657 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 NAP1L5Q96NT1 182 aaPredicted RBP16.28■□□□□ 0.2
PDCD6-212ENST00000614778 PCDHB18PQ96TA0 734 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 HINFPQ9BQA5 517 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 SLC2A11Q9BYW1 496 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 FAM204AQ9H8W3 233 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 CBX8Q9HC52 389 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 CD248Q9HCU0 757 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 DDIT4Q9NX09 232 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 COX16Q9P0S2 106 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 NCDNQ9UBB6 729 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 DAAM1Q9Y4D1 1078 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 RAD54BQ9Y620 910 aa16.28■□□□□ 0.2
PDCD6-212ENST00000614778 KCNU1A8MYU2 1149 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 TBL1XO60907 577 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 CYP1A1P04798 512 aaPredicted RBP16.27■□□□□ 0.2
PDCD6-212ENST00000614778 HOXB2P14652 356 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 ZNF445P59923 1031 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 RNASE9P60153 205 aaKnown RBP16.27■□□□□ 0.2
PDCD6-212ENST00000614778 CDK17Q00537 523 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 ARID5AQ03989 594 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 MS4A13Q5J8X5 152 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 TRNP1Q6NT89 227 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 TRMT11Q7Z4G4 463 aaKnown RBP16.27■□□□□ 0.2
PDCD6-212ENST00000614778 ANKS1BQ7Z6G8 1248 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 LUZP1Q86V48 1076 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 ZNF677Q86XU0 584 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 CHPFQ8IZ52 775 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 CFAP52Q8N1V2 620 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 GABRG3Q99928 467 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 STIM2Q9P246 746 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 RALGAPA1Q6GYQ0 2036 aa16.27■□□□□ 0.2
PDCD6-212ENST00000614778 CEP250Q9BV73 2442 aa16.27■□□□□ 0.19
PDCD6-212ENST00000614778 DCHS1Q96JQ0 3298 aa16.27■□□□□ 0.19
PDCD6-212ENST00000614778 TCRBV21S2A2A0A5A6 115 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 APOEP02649 317 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 TGM1P22735 817 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 CD70P32970 193 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 NOS2P35228 1153 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 SNX16P57768 344 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 ZSCAN23Q3MJ62 389 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 RAP1GAP2Q684P5 730 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 LAIR1Q6GTX8 287 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 KIAA0907Q7Z7F0 614 aaPredicted RBP16.26■□□□□ 0.19
PDCD6-212ENST00000614778 ZDHHC17Q8IUH5 632 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 KIAA2013Q8IYS2 634 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 FRMD1Q8N878 549 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 SLC30A5Q8TAD4 765 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 OLIG1Q8TAK6 271 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 HMGB4Q8WW32 186 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 LMLNQ96KR4 655 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 NPY6RQ99463 290 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 POLMQ9NP87 494 aaPredicted RBP16.26■□□□□ 0.19
PDCD6-212ENST00000614778 PARD6AQ9NPB6 346 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 ABCB8Q9NUT2 735 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 ELOVL2Q9NXB9 296 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 THAP10Q9P2Z0 257 aaPredicted RBP16.26■□□□□ 0.19
PDCD6-212ENST00000614778 RAB23Q9ULC3 237 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 STON1Q9Y6Q2 735 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 LAMA1P25391 3075 aa16.26■□□□□ 0.19
PDCD6-212ENST00000614778 MUC22E2RYF6 1773 aaPredicted RBP16.26■□□□□ 0.19
PDCD6-212ENST00000614778 A0A1B0GTH6 734 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 GOLGA8SH3BPF8 625 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 I6L893 689 aaPredicted RBP16.25■□□□□ 0.19
PDCD6-212ENST00000614778 M0QYT0 321 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 GABRG2P18507 467 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 BCKDHBP21953 392 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 FLT3P36888 993 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 MATKP42679 507 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 IL12RB1P42701 662 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 NME3Q13232 169 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 MPP7Q5T2T1 576 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 FAM102AQ5T9C2 384 aaPredicted RBP16.25■□□□□ 0.19
PDCD6-212ENST00000614778 MMS22LQ6ZRQ5 1243 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 CACNA2D4Q7Z3S7 1137 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
PDCD6-212ENST00000614778 PHLDB2Q86SQ0 1253 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 ADIPOR2Q86V24 386 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 CHSY1Q86X52 802 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 LGI2Q8N0V4 545 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDCD6-212ENST00000614778 HJURPQ8NCD3 748 aaPredicted RBP16.25■□□□□ 0.19
PDCD6-212ENST00000614778 RLN3Q8WXF3 142 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 BAP1Q92560 729 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 BTN2A3PQ96KV6 586 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 PRMT1Q99873 361 aaKnown RBP16.25■□□□□ 0.19
PDCD6-212ENST00000614778 CIPCQ9C0C6 399 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 SLC6A17Q9H1V8 727 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 ANLNQ9NQW6 1124 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 PIGVQ9NUD9 493 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.25■□□□□ 0.198e-8■■■■□ 26.5
PDCD6-212ENST00000614778 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDCD6-212ENST00000614778 TMEM59LQ9UK28 342 aa16.25■□□□□ 0.19
PDCD6-212ENST00000614778 THADAQ6YHU6 1953 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms