RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 SMU1Q2TAY7 513 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 FRMD7Q6ZUT3 714 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 TSEN34Q9BSV6 310 aaKnown RBP14.08□□□□□ -0.16
CHD1-212ENST00000614616 CDH19Q9H159 772 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 RBP1P09455 135 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 BNIP1Q12981 228 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 ADCY4Q8NFM4 1077 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 FAM220BPB1ANY3 271 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 MAGEB2O15479 319 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 UBAP2LQ14157 1087 aaKnown RBP14.08□□□□□ -0.16
CHD1-212ENST00000614616 PIK3R3Q92569 461 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 MED15Q96RN5 788 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 CPNE1Q99829 537 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 RTKNQ9BST9 563 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 KCTD10Q9H3F6 313 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 PLK2Q9NYY3 685 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 NUP50Q9UKX7 468 aa14.08□□□□□ -0.16
CHD1-212ENST00000614616 LGR5O75473 907 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 NAB1Q13506 487 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 PTPAQ15257 358 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 C6orf52Q5T4I8 152 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 SNRNP48Q6IEG0 339 aaKnown RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 NT5DC3Q86UY8 548 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 MYLPFQ96A32 169 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 SLC25A23Q9BV35 468 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 RIBC2Q9H4K1 309 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 PSMD13Q9UNM6 376 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 GTF2IP78347 998 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 HPCAP84074 193 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 GATAD2AQ86YP4 633 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 PM20D2Q8IYS1 436 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 OSGEPQ9NPF4 335 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 MAP3K20Q9NYL2 800 aaKnown RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 ZNF268Q14587 947 aaPredicted RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 KIF13AQ9H1H9 1805 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 SPEF2Q9C093 1822 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 SNAP23O00161 211 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 TFECO14948 347 aaPredicted RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 MYBP10242 640 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 CHI3L1P36222 383 aaPredicted RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 STAT3P40763 770 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 RPL26P61254 145 aaKnown RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 CSNK2BP67870 215 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 CCDC185Q8N715 623 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 MAGEE1Q9HCI5 957 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 NINJ2Q9NZG7 142 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 AFF4Q9UHB7 1163 aaKnown RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 DOLKQ9UPQ8 538 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 FEN1P39748 380 aaKnown RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 PKNOX1P55347 436 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 KRT77Q7Z794 578 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 PNPT1Q8TCS8 783 aaKnown RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 FAR1Q8WVX9 515 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 SH3BP4Q9P0V3 963 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 BMP10O95393 424 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 PENKP01210 267 aaPredicted RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 COX4I1P13073 169 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 SOAT1P35610 550 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 CCDC28AQ8IWP9 274 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 Q96MT0 163 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 CCNB1IP1Q9NPC3 277 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
CHD1-212ENST00000614616 TM7SF2O76062 418 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 SULT1E1P49888 294 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 LIN54Q6MZP7 749 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 PALB2Q86YC2 1186 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 CAMKK1Q8N5S9 505 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 MND1Q9BWT6 205 aa14.07□□□□□ -0.16
CHD1-212ENST00000614616 USP17L5A8MUK1 530 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 DHFRP00374 187 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 ZNF37AP17032 561 aaPredicted RBP14.06□□□□□ -0.16
CHD1-212ENST00000614616 AP1S2P56377 157 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 AUHQ13825 339 aaKnown RBP14.06□□□□□ -0.16
CHD1-212ENST00000614616 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 C2orf40Q9H1Z8 148 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 LIMD1Q9UGP4 676 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 G3V2T6 193 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 CCRL2O00421 344 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 ERMAPQ96PL5 475 aaPredicted RBP14.06□□□□□ -0.16
CHD1-212ENST00000614616 FER1L6Q2WGJ9 1857 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 RARBP10826 455 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 CAPGP40121 348 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 PDK2Q15119 407 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 STILQ15468 1287 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 SHROOM1Q2M3G4 852 aaPredicted RBP14.06□□□□□ -0.16
CHD1-212ENST00000614616 PLET1Q6UQ28 207 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 RAB2BQ8WUD1 216 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 SEC31BQ9NQW1 1179 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 A2ML1A8K2U0 1454 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 TP53INP1Q96A56 240 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 AKAP7Q9P0M2 348 aaPredicted RBP14.06□□□□□ -0.16
CHD1-212ENST00000614616 CDK5RAP2Q96SN8 1893 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 SLC25A3Q00325 362 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 ZNF540Q8NDQ6 660 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 ZSWIM2Q8NEG5 633 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 ACTRT2Q8TDY3 377 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 TCF12Q99081 682 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 IRF2BPLQ9H1B7 796 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms