RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RAB41Q5JT25 222 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 C6orf118Q5T5N4 469 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 C4orf50Q6ZRC1 276 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 C14orf80Q86SX3 495 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 PRPF39Q86UA1 669 aaKnown RBP3.55□□□□□ -1.84
LIG4-205ENST00000614526 CIR1Q86X95 450 aaPredicted RBP3.55□□□□□ -1.84
LIG4-205ENST00000614526 AGGF1Q8N302 714 aaeCLIP3.55□□□□□ -1.84
LIG4-205ENST00000614526 COLGALT1Q8NBJ5 622 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 TFB1MQ8WVM0 346 aaKnown RBP3.55□□□□□ -1.84
LIG4-205ENST00000614526 DYDC1Q8WWB3 177 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 HTR3CQ8WXA8 447 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 THOC1Q96FV9 657 aaKnown RBP3.55□□□□□ -1.84
LIG4-205ENST00000614526 P2RY11Q96G91 374 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 UROC1Q96N76 676 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 PKMYT1Q99640 499 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 PRMT1Q99873 361 aaKnown RBP3.55□□□□□ -1.84
LIG4-205ENST00000614526 CFHR5Q9BXR6 569 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 FTHL17Q9BXU8 183 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 CSNK1G1Q9HCP0 422 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 PAK6Q9NQU5 681 aaPredicted RBP3.55□□□□□ -1.84
LIG4-205ENST00000614526 MARCH5Q9NX47 278 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 KANSL3Q9P2N6 904 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 SLC17A6Q9P2U8 582 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 VANGL2Q9ULK5 521 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 FARP1Q9Y4F1 1045 aaPredicted RBP3.55□□□□□ -1.84
LIG4-205ENST00000614526 CLUHO75153 1309 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 E2F8A0AVK6 867 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TTC24A2A3L6 582 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 WDR91A4D1P6 747 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ZBBXA8MT70 800 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 RASA4BC9J798 803 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 RNF103O00237 685 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 RASA4O43374 803 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 UGT1A9O60656 530 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 PAGE1O75459 146 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 JCHAINP01591 159 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 BRAFP15056 766 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TPH1P17752 444 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 PSMB4P28070 264 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 DEFB103AP81534 67 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 MPP2Q14168 576 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 PSMD5Q16401 504 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ARL13BQ3SXY8 428 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ANKRD20A2Q5SQ80 823 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 C10orf120Q5SQS8 335 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ANKRD20A1Q5TYW2 823 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ANKRD20A3Q5VUR7 823 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 KDM7AQ6ZMT4 941 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 MICALCLQ6ZW33 695 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 DCP1BQ8IZD4 617 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 VPS52Q8N1B4 723 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 PPM1NQ8N819 430 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CCHCR1Q8TD31 782 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 BHMTQ93088 406 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 FBXO32Q969P5 355 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 NT5C3BQ969T7 300 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 FCRL2Q96LA5 508 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 SERPINB12Q96P63 405 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CCDC77Q9BR77 488 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ATXN3LQ9H3M9 355 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 UGT1A7Q9HAW7 530 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 UGT1A10Q9HAW8 530 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 UGT1A8Q9HAW9 530 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ALG13Q9NP73 1137 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 PAK5Q9P286 719 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 KLHL8Q9P2G9 620 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 PCDHB5Q9Y5E4 795 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 USP3Q9Y6I4 520 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CEP290O15078 2479 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CHD7Q9P2D1 2997 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 A0A087WUV0 522 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 GOLGA6L7A0A1B0GV03 622 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TMEM120BA0PK00 339 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TNFRSF10BO14763 440 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ALOX15BO15296 676 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 EIF3HO15372 352 aaKnown RBP eCLIP3.54□□□□□ -1.846e-6■■■□□ 15.8
LIG4-205ENST00000614526 OAZ2O95190 189 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 VIMP08670 466 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 TYMPP19971 482 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 MNX1P50219 401 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 MAPRE1Q15691 268 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 ZKSCAN8Q15776 578 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 AGBL2Q5U5Z8 902 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 RASIP1Q5U651 963 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ZNF280DQ6N043 979 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 OTOP3Q7RTS5 596 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 NPAS4Q8IUM7 802 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CDKL3Q8IVW4 592 aaPredicted RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 NUP93Q8N1F7 819 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 TLCD1Q96CP7 247 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 KLC2Q9H0B6 622 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 ZCWPW1Q9H0M4 648 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CCSER2Q9H7U1 834 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 CYLDQ9NQC7 956 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 INTS9Q9NV88 658 aaKnown RBP3.54□□□□□ -1.84
LIG4-205ENST00000614526 OGDHLQ9ULD0 1010 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 SHOC2Q9UQ13 582 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 SQORQ9Y6N5 450 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 SCN5AQ14524 2016 aa3.54□□□□□ -1.84
LIG4-205ENST00000614526 SLC12A8A0AV02 714 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms