RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 RSC1A1Q92681 617 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 ZNF48Q96MX3 618 aaPredicted RBP5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 TRIM2Q9C040 744 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 WDR12Q9GZL7 423 aaKnown RBP5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 EPS8L2Q9H6S3 715 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 ELOVL5Q9NYP7 299 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 MAGED2Q9UNF1 606 aaPredicted RBP5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 EMSYQ7Z589 1322 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 LOC105369274A0A096LPK9 316 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 LOC102723532A0A0G2JNH3 316 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 SOCS2O14508 198 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 ASNA1O43681 348 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 SOX2P48431 317 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 MTA1Q13330 715 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 PTK2BQ14289 1009 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 SPARCL1Q14515 664 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 BRD3Q15059 726 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 RABEP1Q15276 862 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 AAK1Q2M2I8 961 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 RINT1Q6NUQ1 792 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 WDR93Q6P2C0 686 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 PGBD2Q6P3X8 592 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 ANKRD13BQ86YJ7 626 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 OR4N4Q8N0Y3 316 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 SAMD3Q8N6K7 520 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 ZNF527Q8NB42 609 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 WIPF2Q8TF74 440 aaPredicted RBP5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 TRMT61AQ96FX7 289 aaKnown RBP5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 SLC39A13Q96H72 371 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 FCRL4Q96PJ5 515 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 TMEM184CQ9NVA4 438 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 ZNF521Q96K83 1311 aa5.73□□□□□ -1.49
SCAMP1-205ENST00000614488 SLC22A23A1A5C7 686 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 AQP12BA6NM10 295 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 SKAP2O75563 359 aaPredicted RBP5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 RPP40O75818 363 aaKnown RBP5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 CER1O95813 267 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 AKR1A1P14550 325 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 ST6GAL1P15907 406 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 KLRK1P26718 216 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 TLE3Q04726 772 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 RBMS2Q15434 407 aaKnown RBP5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 FAM57BQ71RH2 274 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 PIP4P1Q86T03 277 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 SRFBP1Q8NEF9 429 aaKnown RBP5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 ZFPM2Q8WW38 1151 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 KAT2BQ92831 832 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 EID2BQ96D98 161 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 AFG3L2Q9Y4W6 797 aa5.72□□□□□ -1.49
SCAMP1-205ENST00000614488 C3orf70A6NLC5 250 aaPredicted RBP5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 SYT5O00445 386 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 TMEM191BP0C7N4 346 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 IGFBP2P18065 325 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 AKT1P31749 480 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 CPA2P48052 419 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 TWIST1Q15672 202 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 TRIM60Q495X7 471 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 ZNF474Q6S9Z5 364 aaPredicted RBP5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 ZNF793Q6ZN11 406 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 RHPN2Q8IUC4 686 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 ADPRHL1Q8NDY3 354 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 MPLKIPQ8TAP9 179 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 STYXQ8WUJ0 223 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 MCRS1Q96EZ8 462 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 HMCESQ96FZ2 354 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 REXO5Q96IC2 774 aaKnown RBP5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 ZFYVE19Q96K21 471 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 GPR78Q96P69 363 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 PRDM16Q9HAZ2 1276 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 OBP2BQ9NPH6 170 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 B3GNT3Q9Y2A9 372 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 ZBTB1Q9Y2K1 713 aa5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 ZNF335Q9H4Z2 1342 aaPredicted RBP5.71□□□□□ -1.5
SCAMP1-205ENST00000614488 LY6G6EA0A0G2JKS1 128 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 LGALS16A8MUM7 142 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 F8W810 466 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 DNPH1O43598 174 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 PPP6R2O75170 966 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 ALDOAP04075 364 aaKnown RBP5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 PRF1P14222 555 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 NR4A2P43354 598 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 KRTAP10-11P60412 298 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 B4GALNT1Q00973 533 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 ANXA2RQ3ZCQ2 193 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 ZACNQ401N2 412 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 SLC39A5Q6ZMH5 540 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 TRMOQ9BU70 441 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 CRB3Q9BUF7 120 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 SCNM1Q9BWG6 230 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 MOV10Q9HCE1 1003 aaKnown RBP5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 PLCB1Q9NQ66 1216 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 PAPOLBQ9NRJ5 636 aaKnown RBP5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 TMEM45AQ9NWC5 275 aa5.7□□□□□ -1.5
SCAMP1-205ENST00000614488 LARGE1O95461 756 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 CYP3A4P08684 503 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 RFPL3SP0C7P2 107 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 TGM2P21980 687 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 PDIA3P30101 505 aaKnown RBP5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 POLE2P56282 527 aa5.69□□□□□ -1.5
SCAMP1-205ENST00000614488 SLC37A1P57057 533 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms