RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 DEUP1Q05D60 604 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 SCAPQ12770 1279 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 TAF12Q16514 161 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 RAB6CQ53S08 254 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 PPM1LQ5SGD2 360 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 TXNRD3NBQ6F5E7 133 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 KLHDC10Q6PID8 442 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 DNAJB7Q7Z6W7 309 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-212ENST00000613856 TADA2BQ86TJ2 420 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 C1orf210Q8IVY1 113 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 ELMOD1Q8N336 334 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 CMASQ8NFW8 434 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF707Q96C28 371 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-212ENST00000613856 SERPINB11Q96P15 392 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 RAB6CQ9H0N0 254 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 SEMA4AQ9H3S1 761 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 ARHGEF3Q9NR81 526 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 PIGVQ9NUD9 493 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 DDIT4Q9NX09 232 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 IGSF9Q9P2J2 1179 aa11.87□□□□□ -0.51
SLIRP-212ENST00000613856 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-212ENST00000613856 MTF2Q9Y483 593 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-212ENST00000613856 CLUHO75153 1309 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 NOTCH4Q99466 2003 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 DCDC2BA2VCK2 349 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF840PA6NDX5 716 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF487B1APH4 448 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 CEP104O60308 925 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 ZRANB2O95218 330 aaKnown RBP eCLIP11.86□□□□□ -0.51
SLIRP-212ENST00000613856 KRT1P04264 644 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 RARAP10276 462 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 PYGMP11217 842 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 SRFP11831 508 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 GJC1P36383 396 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 ARSEP51690 589 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 EPHA5P54756 1037 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 PPP2R5EQ16537 467 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 DPYSL2Q16555 572 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 TAZQ16635 292 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 PABPC1LQ4VXU2 614 aaKnown RBP11.86□□□□□ -0.51
SLIRP-212ENST00000613856 BRMS1LQ5PSV4 323 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 SND1Q7KZF4 910 aaKnown RBP eCLIP11.86□□□□□ -0.511e-12■■□□□ 11.5
SLIRP-212ENST00000613856 RSRC2Q7L4I2 434 aaKnown RBP11.86□□□□□ -0.51
SLIRP-212ENST00000613856 TMC8Q8IU68 726 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 RCOR2Q8IZ40 523 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 CEP112Q8N8E3 955 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 MNS1Q8NEH6 495 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 PJA1Q8NG27 643 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 FAM71BQ8TC56 605 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF512Q96ME7 567 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-212ENST00000613856 NAP1L3Q99457 506 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-212ENST00000613856 SNRNP25Q9BV90 132 aaKnown RBP11.86□□□□□ -0.51
SLIRP-212ENST00000613856 LRRC3Q9BY71 257 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 IL21Q9HBE4 155 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF334Q9HCZ1 680 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-212ENST00000613856 ZDHHC7Q9NXF8 308 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 TRPM5Q9NZQ8 1165 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 PCSK1NQ9UHG2 260 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 SIT1Q9Y3P8 196 aa11.86□□□□□ -0.51
SLIRP-212ENST00000613856 LRRD1A4D1F6 860 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 C3orf70A6NLC5 250 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-212ENST00000613856 TLR5O60602 858 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 FGF19O95750 216 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 OAS1P00973 400 aaKnown RBP11.85□□□□□ -0.51
SLIRP-212ENST00000613856 F11P03951 625 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 PFKLP17858 780 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 CETN2P41208 172 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 PAFAH1B1P43034 410 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 NME3Q13232 169 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF211Q13398 564 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-212ENST00000613856 HTR4Q13639 388 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 PPP2R5DQ14738 602 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 PDK2Q15119 407 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 SMTNL2Q2TAL5 461 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 ERMARDQ5T6L9 678 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 CCDC181Q5TID7 509 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 SCYL2Q6P3W7 929 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 SPOCD1Q6ZMY3 1216 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 GET4Q7L5D6 327 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-212ENST00000613856 TMEM150AQ86TG1 271 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 FAM131BQ86XD5 332 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 CCDC185Q8N715 623 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 LEMD2Q8NC56 503 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 ADAM32Q8TC27 787 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 CAPZA3Q96KX2 299 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.85□□□□□ -0.51
SLIRP-212ENST00000613856 ARHGEF38Q9NXL2 777 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.85□□□□□ -0.51
SLIRP-212ENST00000613856 RCOR3Q9P2K3 495 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-212ENST00000613856 EPS15L1Q9UBC2 864 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 FZD10Q9ULW2 581 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 AP4E1Q9UPM8 1137 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 TLR6Q9Y2C9 796 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 EFR3BQ9Y2G0 817 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 NUMBLQ9Y6R0 609 aa11.85□□□□□ -0.51
SLIRP-212ENST00000613856 CACNA1GO43497 2377 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 PDE2AO00408 941 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-212ENST00000613856 RIOK3O14730 519 aaKnown RBP11.84□□□□□ -0.51
SLIRP-212ENST00000613856 XYLBO75191 536 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms