RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 ARMCX1Q9P291 453 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 DNAJB4Q9UDY4 337 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PRR12Q9ULL5 1215 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 UBQLN1Q9UMX0 589 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PSMD13Q9UNM6 376 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PIN4Q9Y237 131 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PCDHGA3Q9Y5H0 932 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ARHGAP23Q9P227 1491 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 C5orf60A6NFR6 353 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 C5orf58C9J3I9 102 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 CD3EAPO15446 510 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 FBXO21O94952 628 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PON1P27169 355 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 DNAJA1P31689 397 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 GP5P40197 560 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ITGA7Q13683 1181 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 C5orf22Q49AR2 442 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NAPEPLDQ6IQ20 393 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 TIGD7Q6NT04 549 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NEK5Q6P3R8 708 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NEK10Q6ZWH5 1172 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 CCDC36Q8IYA8 594 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ZCCHC9Q8N567 271 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 SLC30A5Q8TAD4 765 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 SGF29Q96ES7 293 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 REEP2Q9BRK0 252 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 MROH8Q9H579 483 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 GNPTGQ9UJJ9 305 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 V9GYQ6 96 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NWD1Q149M9 1564 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PDE2AO00408 941 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 GSC2O15499 205 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 TADA2AO75478 443 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ANXA9O76027 345 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 FARP2O94887 1054 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PDGFRBP09619 1106 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ODC1P11926 461 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NPR3P17342 541 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 RASA1P20936 1047 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 FCGRTP55899 365 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 RTP1P59025 263 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PDK2Q15119 407 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ZNF57Q68EA5 555 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NUDT12Q9BQG2 462 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 SLC25A23Q9BV35 468 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 COLEC11Q9BWP8 271 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 OSBPL7Q9BZF2 842 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PHACTR1Q9C0D0 580 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 INTS13Q9NVM9 706 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 CEP170BQ9Y4F5 1589 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 CCDC162PA2VCL2 907 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 CCR3P51677 355 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 NME3Q13232 169 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 TSNQ15631 228 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 BOLA3Q53S33 107 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 AARS2Q5JTZ9 985 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ZNF544Q6NX49 715 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 PRR23CQ6ZRP0 262 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 NOP9Q86U38 636 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 PQLC1Q8N2U9 271 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 LRRC20Q8TCA0 184 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 HES6Q96HZ4 224 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SRPK1Q96SB4 655 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 RMND5AQ9H871 391 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 HPS4Q9NQG7 708 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 NCKIPSDQ9NZQ3 722 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SPATA7Q9P0W8 599 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 AGAP1Q9UPQ3 857 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 PIPSLA2A3N6 862 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 TRIM38O00635 465 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 GPR182O15218 404 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 EDF1O60869 148 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 NOS1APO75052 506 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SIN3BO75182 1162 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 VCLP18206 1134 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ANXA11P50995 505 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 TGFB2P61812 414 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 PLIN5Q00G26 463 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SYTL3Q4VX76 610 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 C16orf62Q7Z3J2 963 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ERI1Q8IV48 349 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 FBXL16Q8N461 479 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 PIK3C3Q8NEB9 887 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SYTL5Q8TDW5 730 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 CPA5Q8WXQ8 436 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 GMCL1Q96IK5 515 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 CCNB1IP1Q9NPC3 277 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ARHGEF3Q9NR81 526 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 DPP7Q9UHL4 492 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 EIF3LQ9Y262 564 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 DFFAO00273 331 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 GNB5O14775 395 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 TLR2O60603 784 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 F9P00740 461 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 RARBP10826 455 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 STAT5AP42229 794 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 NAMPTP43490 491 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 CCT8P50990 548 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 TAF5Q15542 800 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms