RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 PSMD5Q16401 504 aa18.83■□□□□ 0.6
SNAPC3-207ENST00000610884 C1orf53Q5VUE5 145 aa18.83■□□□□ 0.6
SNAPC3-207ENST00000610884 SMYD5Q6GMV2 418 aa18.83■□□□□ 0.6
SNAPC3-207ENST00000610884 CNPY4Q8N129 248 aa18.83■□□□□ 0.6
SNAPC3-207ENST00000610884 LRRC45Q96CN5 670 aa18.83■□□□□ 0.6
SNAPC3-207ENST00000610884 YME1L1Q96TA2 773 aa18.83■□□□□ 0.6
SNAPC3-207ENST00000610884 CCSER2Q9H7U1 834 aa18.83■□□□□ 0.6
SNAPC3-207ENST00000610884 SPTBN5Q9NRC6 3674 aaKnown RBP18.83■□□□□ 0.6
SNAPC3-207ENST00000610884 KCNK1O00180 336 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 HOXA2O43364 376 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 ERCC2P18074 760 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 AP1B1Q10567 949 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 NFE2Q16621 373 aaPredicted RBP18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 FNBP1LQ5T0N5 605 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 RNF187Q5TA31 235 aaPredicted RBP18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 EMC10Q5UCC4 262 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 HIBCHQ6NVY1 386 aaPredicted RBP18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 DRICH1Q6PGQ1 229 aaPredicted RBP18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 DENND5BQ6ZUT9 1274 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 RFX8Q6ZV50 586 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 SPATS2Q86XZ4 545 aaKnown RBP18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 CCDC13Q8IYE1 715 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 EPS8L3Q8TE67 593 aaKnown RBP18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 CPT1BQ92523 772 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 RUNDC3BQ96NL0 473 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 RBM15Q96T37 977 aaKnown RBP eCLIP18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 TRIM56Q9BRZ2 755 aaKnown RBP18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 NDFIP2Q9NV92 336 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 TBC1D4O60343 1298 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 TMEM63AO94886 807 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 LRIG2O94898 1065 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 EPHB2P29323 1055 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 GPR17Q13304 367 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 MICALCLQ6ZW33 695 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 FBXO32Q969P5 355 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 MPP6Q9NZW5 540 aa18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 TPX2Q9ULW0 747 aaKnown RBP18.82■□□□□ 0.6
SNAPC3-207ENST00000610884 DNALI1O14645 258 aaPredicted RBP18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 VAV1P15498 845 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 IFFO1Q0D2I5 559 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 OLIG2Q13516 323 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 SMAD1Q15797 465 aaKnown RBP18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 LONRF1Q17RB8 773 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 RNASEH2BQ5TBB1 312 aaKnown RBP18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 TTC13Q8NBP0 860 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 FAF2Q96CS3 445 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 PABPC3Q9H361 631 aaKnown RBP18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 SAYSD1Q9NPB0 183 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 CTNNAL1Q9UBT7 734 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 COL4A6Q14031 1691 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 ARHGEF37A1IGU5 675 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 RIPK2O43353 540 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 METTL18O95568 372 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 MNAT1P51948 309 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 USP41Q3LFD5 358 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 MFSD5Q6N075 450 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 C14orf80Q86SX3 495 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 RAB6BQ9NRW1 208 aa18.81■□□□□ 0.6
SNAPC3-207ENST00000610884 GRIA1P42261 906 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 CXCR3P49682 368 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 TPI1P60174 286 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 LMNB2Q03252 620 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 CCDC38Q502W7 563 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 LRIG3Q6UXM1 1119 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 ZNF689Q96CS4 500 aaPredicted RBP18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 ZMYND8Q9ULU4 1186 aaPredicted RBP18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 MYO16Q9Y6X6 1858 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 LCHNA4D1U4 455 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 PAGE1O75459 146 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 FAM107AO95990 144 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 IFT88Q13099 833 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 ARHGAP36Q6ZRI8 547 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 ANKS3Q6ZW76 656 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 ZBED8Q8IZ13 594 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 VPS52Q8N1B4 723 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 EIF1ADQ8N9N8 165 aaKnown RBP18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 TMEM169Q96HH4 297 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 PRDM12Q9H4Q4 367 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 CYP4F11Q9HBI6 524 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 PCDH9Q9HC56 1237 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 ABCC13Q9NSE7 274 aa18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.8■□□□□ 0.6
SNAPC3-207ENST00000610884 FSBPO95073 299 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 YWHAQP27348 245 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 KRT71Q3SY84 523 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 ARFGAP2Q8N6H7 521 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 OR6C75A6NL08 312 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 RARGP13631 454 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 DPYSQ14117 519 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 C10orf120Q5SQS8 335 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 DENND2CQ68D51 928 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 SYDE1Q6ZW31 735 aaPredicted RBP18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 PRCCQ92733 491 aaPredicted RBP18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 FCRL2Q96LA5 508 aaPredicted RBP18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 TMEM175Q9BSA9 504 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 TBK1Q9UHD2 729 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 TRANK1O15050 2925 aa18.79■□□□□ 0.6
SNAPC3-207ENST00000610884 ABHD14A-ACY1A0A1B0GW23 586 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 IRAK2O43187 625 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms