RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PSD3Q9NYI0 1048 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 CD274Q9NZQ7 290 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 SLC24A2Q9UI40 661 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 PHTF1Q9UMS5 762 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 COL16A1Q07092 1604 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 LRCH4O75427 683 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 SUPT7LO94864 414 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 KPNA1P52294 538 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 DUSP4Q13115 394 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 SLC45A4Q5BKX6 768 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 TPGS1Q6ZTW0 290 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 MON1BQ7L1V2 547 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 POLNQ7Z5Q5 900 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ITIH5Q86UX2 942 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 XYLT1Q86Y38 959 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 DBF4BQ8NFT6 615 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 KCNV2Q8TDN2 545 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 LPIN3Q9BQK8 851 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 UBXN6Q9BZV1 441 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 DERAQ9Y315 318 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 NR2E1Q9Y466 385 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 L3MBTL1Q9Y468 752 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 TRDMT1O14717 391 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 XPO1O14980 1071 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 TRIM66O15016 1216 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 TIMM44O43615 452 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 SRP72O76094 671 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ESRRBO95718 433 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 SNAI1O95863 264 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 INHAP05111 366 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 STMN1P16949 149 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 HMOX2P30519 316 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 PTPN7P35236 360 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 CHKAP35790 457 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 KBTBD12Q3ZCT8 623 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ANKRD20A2Q5SQ80 823 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ANKRD20A1Q5TYW2 823 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 DUPD1Q68J44 220 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ZCCHC9Q8N567 271 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 LZTR1Q8N653 840 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 LRRC57Q8N9N7 239 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 PDZD8Q8NEN9 1154 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 LPCAT1Q8NF37 534 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 EML4Q9HC35 981 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 CNGB3Q9NQW8 809 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ETNK2Q9NVF9 386 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 DDX20Q9UHI6 824 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 RUVBL2Q9Y230 463 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 PTCH2Q9Y6C5 1203 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ADGRA2Q96PE1 1338 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 COL18A1P39060 1754 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 MYBPHLA2RUH7 354 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 CFAP99D6REC4 459 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 MAP2K7O14733 419 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 DDX3YO15523 660 aaKnown RBP7.46□□□□□ -1.21
CSDE1-218ENST00000610726 ANP32DO95626 131 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 ATP4AP20648 1035 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 TAF11Q15544 211 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 SPDYAQ5MJ70 313 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 NUP93Q8N1F7 819 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 UROC1Q96N76 676 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 MRPL17Q9NRX2 175 aaKnown RBP7.46□□□□□ -1.21
CSDE1-218ENST00000610726 UTP6Q9NYH9 597 aaKnown RBP7.46□□□□□ -1.21
CSDE1-218ENST00000610726 TAF1P21675 1872 aa7.46□□□□□ -1.21
CSDE1-218ENST00000610726 ARL5CA6NH57 179 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 NCF1BA6NI72 391 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 RASSF10A6NK89 507 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 NCF1CA8MVU1 366 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ADCY6O43306 1168 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 MSI1O43347 362 aaKnown RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 BUD23O43709 281 aaKnown RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 GLRA3O75311 464 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 LGR5O75473 907 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SKAP2O75563 359 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SPATA31D3P0C874 917 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 FGFR1P11362 822 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 NCF1P14598 390 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 MAP4P27816 1152 aaKnown RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SOX11P35716 441 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 PGM1P36871 562 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 RGS4P49798 205 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 FAAP100Q0VG06 881 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 CSHL1Q14406 222 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SYTL3Q4VX76 610 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SGO1Q5FBB7 561 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 RETSATQ6NUM9 610 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SPATA31D4Q6ZUB0 917 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ANKS3Q6ZW76 656 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SRLQ86TD4 932 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 MFN1Q8IWA4 741 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ALLCQ8N6M5 410 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 OR52K1Q8NGK4 314 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 NCLNQ969V3 563 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SNX27Q96L92 541 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 PCYT2Q99447 389 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 PCDH18Q9HCL0 1135 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 HMGXB4Q9UGU5 601 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 DRG1Q9Y295 367 aaKnown RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ACOT9Q9Y305 439 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 A0A0A0MRY4 1105 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms