RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 NPY6RQ99463 290 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 AGPAT1Q99943 283 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 TRIM62Q9BVG3 475 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 ANLNQ9NQW6 1124 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 SLC8A2Q9UPR5 921 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 EP300Q09472 2414 aaPredicted RBP13.24□□□□□ -0.29
CD9-212ENST00000610354 USP34Q70CQ2 3546 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 SPAG17Q6Q759 2223 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 WDR87Q6ZQQ6 2873 aa13.24□□□□□ -0.29
CD9-212ENST00000610354 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 LRRC53A6NM62 1247 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 GOLGA8SH3BPF8 625 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 TBL1XO60907 577 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 GJB6O95452 261 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 CAVIN2O95810 425 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 MOCS2O96007 188 aaPredicted RBP13.23□□□□□ -0.29
CD9-212ENST00000610354 FERP16591 822 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 MATKP42679 507 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 WASP42768 502 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 SLC11A2P49281 568 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 NRLP54845 237 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 SNX16P57768 344 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 RPS24P62847 133 aaKnown RBP13.23□□□□□ -0.29
CD9-212ENST00000610354 CRY1Q16526 586 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 RAB6CQ53S08 254 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 MS4A13Q5J8X5 152 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 ARTNQ5T4W7 220 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 FAM102AQ5T9C2 384 aaPredicted RBP13.23□□□□□ -0.29
CD9-212ENST00000610354 LRSAM1Q6UWE0 723 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 BNIPLQ7Z465 357 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 KIAA0907Q7Z7F0 614 aaPredicted RBP13.23□□□□□ -0.29
CD9-212ENST00000610354 LONP2Q86WA8 852 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 ATRIPQ8WXE1 791 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 ACDQ96AP0 544 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 TBCBQ99426 244 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 PRMT1Q99873 361 aaKnown RBP13.23□□□□□ -0.29
CD9-212ENST00000610354 C11orf70Q9BRQ4 267 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 RAB6CQ9H0N0 254 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 FAM204AQ9H8W3 233 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 CD248Q9HCU0 757 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 DDIT4Q9NX09 232 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.23□□□□□ -0.29
CD9-212ENST00000610354 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 MYO6Q9UM54 1294 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 PTPRZ1P23471 2315 aaPredicted RBP13.23□□□□□ -0.29
CD9-212ENST00000610354 ABCA7Q8IZY2 2146 aa13.23□□□□□ -0.29
CD9-212ENST00000610354 MUC22E2RYF6 1773 aaPredicted RBP13.22□□□□□ -0.29
CD9-212ENST00000610354 TCRBV5S1A1TA0A578 114 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 WASH3PC4AMC7 463 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 M0QYT0 321 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 GFRA3O60609 400 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 CYBBP04839 570 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 TACR2P21452 398 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 HLA-FP30511 346 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 ATXN1P54253 815 aaKnown RBP13.22□□□□□ -0.29
CD9-212ENST00000610354 UBASH3AP57075 661 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 CENPCQ03188 943 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 PPP2R5DQ14738 602 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 RAP1GAP2Q684P5 730 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 ZC3H14Q6PJT7 736 aaKnown RBP13.22□□□□□ -0.29
CD9-212ENST00000610354 TRIM72Q6ZMU5 477 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 PHF13Q86YI8 300 aaPredicted RBP13.22□□□□□ -0.29
CD9-212ENST00000610354 CFAP52Q8N1V2 620 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 CAMKK1Q8N5S9 505 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 ZNF513Q8N8E2 541 aaPredicted RBP13.22□□□□□ -0.29
CD9-212ENST00000610354 CCDC26Q8TAB7 109 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 JOSD2Q8TAC2 188 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 EPC1Q9H2F5 836 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 TMPRSS4Q9NRS4 437 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 PIGVQ9NUD9 493 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.22□□□□□ -0.29
CD9-212ENST00000610354 TAS2R14Q9NYV8 317 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 AIPL1Q9NZN9 384 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 IFNKQ9P0W0 207 aa13.22□□□□□ -0.29
CD9-212ENST00000610354 CKAP5Q14008 2032 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 CCDC163A0A0D9SF12 145 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 ADCY5O95622 1261 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 APBB3O95704 486 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 LMNAP02545 664 aaKnown RBP13.21□□□□□ -0.29
CD9-212ENST00000610354 APOEP02649 317 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 CXCR3P49682 368 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 IRAK1P51617 712 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 ZNF445P59923 1031 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 NME3Q13232 169 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 HSF5Q4G112 596 aaPredicted RBP13.21□□□□□ -0.29
CD9-212ENST00000610354 PREPLQ4J6C6 727 aaPredicted RBP13.21□□□□□ -0.29
CD9-212ENST00000610354 FIGNQ5HY92 759 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 MPP7Q5T2T1 576 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 MON1BQ7L1V2 547 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 ZNF571Q7Z3V5 609 aaPredicted RBP13.21□□□□□ -0.29
CD9-212ENST00000610354 C14orf80Q86SX3 495 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 ADIPOR2Q86V24 386 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 RASSF3Q86WH2 238 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 DNAAF5Q86Y56 855 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 LGI2Q8N0V4 545 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 EMC1Q8N766 993 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.21□□□□□ -0.29
CD9-212ENST00000610354 ATP6V0D2Q8N8Y2 350 aa13.21□□□□□ -0.29
CD9-212ENST00000610354 KCNV2Q8TDN2 545 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms