RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 THAP4Q8WY91 577 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 NPIPB3Q92617 1050 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 GOLGA1Q92805 767 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 RILPL2Q969X0 211 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 HS6ST2Q96MM7 605 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 LIN7CQ9NUP9 197 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 SH3BP4Q9P0V3 963 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 FEM1BQ9UK73 627 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 FZD4Q9ULV1 537 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 ZBTB1Q9Y2K1 713 aa4.87□□□□□ -1.63
SMCHD1-213ENST00000609587 SLC38A8A6NNN8 435 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 B9A039 149 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 E7EVH7 732 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 NKX2-8O15522 239 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 KRT38O76015 456 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 JTBO76095 146 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 MT-CO3P00414 261 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 MATN1P21941 496 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 DUSP1P28562 367 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 MAPK9P45984 424 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 TAF12Q16514 161 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 TBRG1Q3YBR2 411 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 GALNTL6Q49A17 601 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 FBXO47Q5MNV8 452 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 CYP26C1Q6V0L0 522 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 AMIGO2Q86SJ2 522 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 C2CD5Q86YS7 1000 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 LINC01465Q8N7H1 131 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 MAFAQ8NHW3 353 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 GLMPQ8WWB7 406 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 SDCCAG3Q96C92 435 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 ADGRE3Q9BY15 652 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 CDCP1Q9H5V8 836 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 ABHD10Q9NUJ1 306 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 SAGE1Q9NXZ1 904 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 RRN3Q9NYV6 651 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 ADAM21Q9UKJ8 722 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 RAB21Q9UL25 225 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 TRPC5Q9UL62 973 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 GTF2A1LQ9UNN4 478 aa4.86□□□□□ -1.63
SMCHD1-213ENST00000609587 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 H7C1Q1 480 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 EIF3FO00303 357 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 FYB1O15117 783 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 GCATO75600 419 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 MBPP02686 304 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 GRK5P34947 590 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 PAPOLAP51003 745 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 FAM3BP58499 235 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 ACTR2P61160 394 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 RPL15P61313 204 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 RBM6P78332 1123 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 MFSD13AQ14CX5 517 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 TMEM65Q6PI78 240 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 SERPINA13PQ6UXR4 307 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 SYT13Q7L8C5 426 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 REPS1Q96D71 796 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 UBXN10Q96LJ8 280 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 CCDC17Q96LX7 622 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 PYM1Q9BRP8 204 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 C1QTNF7Q9BXJ2 289 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 G6PC2Q9NQR9 355 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 ASIC5Q9NY37 505 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 KCND3Q9UK17 655 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 SLC12A4Q9UP95 1085 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 WNT6Q9Y6F9 365 aa4.85□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3DA0A087WVF3 549 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3IA0A087WXS9 549 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3EA0A087X179 549 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3KA0A087X1G2 549 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3BA6NDS4 549 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3FA6NER0 549 aaPredicted RBP4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TTC34A8MYJ7 566 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TARM1B6A8C7 271 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3LB9A6J9 549 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 CLIC1O00299 241 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TK1P04183 234 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 SLC3A2P08195 630 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3HP0C7X1 549 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 PEPDP12955 493 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 RXRAP19793 462 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 RBM5P52756 815 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 WDR5P61964 334 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 KCNB1Q14721 858 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 SMAD1Q15797 465 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 CNGA3Q16281 694 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3GQ6DHY5 549 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 DGAT2L7PQ6IED9 249 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3CQ6IPX1 549 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 WDR93Q6P2C0 686 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 DCDC5Q6ZRR9 648 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 HERC6Q8IVU3 1022 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TBC1D3Q8IZP1 549 aaPredicted RBP4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 AKAP1Q92667 903 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 KAZALD1Q96I82 304 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 ZNF778Q96MU6 729 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 FYTTD1Q96QD9 318 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 ELOVL1Q9BW60 279 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 TWSG1Q9GZX9 223 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms