RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 TAF6LQ9Y6J9 622 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 GPR182O15218 404 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 MPZL3Q6UWV2 235 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 SAPCD2Q86UD0 394 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 VPS28Q9UK41 221 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 SSTR1P30872 391 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 TMEM132CQ8N3T6 1108 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 PNMA8CA0A1B0GUJ8 204 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 VTI1BQ9UEU0 232 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 LDLRP01130 860 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 SCNN1BP51168 640 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 HERC6Q8IVU3 1022 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 TRIM63Q969Q1 353 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 L1RE1Q9UN81 338 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 H3BQF6 201 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 IFRD1O00458 451 aaPredicted RBP13.37□□□□□ -0.27
USP6NL-205ENST00000609104 PLK1P53350 603 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 SCARA3Q6AZY7 606 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 TRMT11Q7Z4G4 463 aaKnown RBP13.37□□□□□ -0.27
USP6NL-205ENST00000609104 MROH7Q68CQ1 1323 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 A0A0A6YYK5 440 aaPredicted RBP13.37□□□□□ -0.27
USP6NL-205ENST00000609104 LOC100506127A0A0U1RQW1 187 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 SLC12A8A0AV02 714 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 ITGADQ13349 1161 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 GIT2Q14161 759 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 PLA2G12BQ9BX93 195 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 KLHL28Q9NXS3 571 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 PSMD12O00232 456 aaPredicted RBP13.37□□□□□ -0.27
USP6NL-205ENST00000609104 RNASEH1O60930 286 aaKnown RBP13.37□□□□□ -0.27
USP6NL-205ENST00000609104 CDC25CP30307 473 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 NDUFA5Q16718 116 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 CHST13Q8NET6 341 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 MYLK2Q9H1R3 596 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 POLR1BQ9H9Y6 1135 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 MYOZ2Q9NPC6 264 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 REREQ9P2R6 1566 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 SEC22BO75396 215 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 OR6B1O95007 311 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 MSH3P20585 1137 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 TGM3Q08188 693 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 KIAA0408Q6ZU52 694 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 KIAA1257Q9ULG3 409 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 TSPAN19P0C672 248 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 CCT3P49368 545 aaKnown RBP13.36□□□□□ -0.27
USP6NL-205ENST00000609104 PTENP60484 403 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ZNF621Q6ZSS3 439 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 CASTOR2A6NHX0 329 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 MYL12BO14950 172 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 RAD51BO15315 384 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ITGALP20701 1170 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ATAD3BQ5T9A4 648 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ENGASEQ8NFI3 743 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 PYDC1Q8WXC3 89 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 DCXO43602 365 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 CKMP06732 381 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 NPTX2P47972 431 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 KLHL12Q53G59 568 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 SPANXN3Q5MJ09 141 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ZFP1Q6P2D0 407 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 TFAP2DQ7Z6R9 452 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ZDHHC13Q8IUH4 622 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 USP7Q93009 1102 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 TBCDQ9BTW9 1192 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 INVSQ9Y283 1065 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 CYP2A7P20853 494 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ZCCHC23Q6ZST2 131 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ILDR2Q71H61 639 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 TMEM169Q96HH4 297 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 SLITRK2Q9H156 845 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 MTIF3Q9H2K0 278 aaKnown RBP13.36□□□□□ -0.27
USP6NL-205ENST00000609104 MRPL42Q9Y6G3 142 aaKnown RBP13.36□□□□□ -0.27
USP6NL-205ENST00000609104 MAGEB16A2A368 324 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ZC3H11AO75152 810 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■■■ 37.4
USP6NL-205ENST00000609104 PAX7P23759 505 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 CLCN3P51790 818 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 CDRT15Q96T59 188 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 WDR41Q9HAD4 459 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 RPL21P46778 160 aaKnown RBP13.36□□□□□ -0.27
USP6NL-205ENST00000609104 MGAT5Q09328 741 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 POMGNT2Q8NAT1 580 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 OXNAD1Q96HP4 312 aaPredicted RBP13.36□□□□□ -0.27
USP6NL-205ENST00000609104 CELF6Q96J87 481 aaKnown RBP13.36□□□□□ -0.27
USP6NL-205ENST00000609104 MYH6P13533 1939 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 PCDH8O95206 1070 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 F9P00740 461 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 FBXO39Q8N4B4 442 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 MICAL2O94851 1124 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ACADMP11310 421 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 ELK3P41970 407 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 NPY2RP49146 381 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 PRKAA1Q13131 559 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 DNAJC14Q6Y2X3 702 aaPredicted RBP13.36□□□□□ -0.27
USP6NL-205ENST00000609104 EDEM1Q92611 657 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 CIPCQ9C0C6 399 aa13.36□□□□□ -0.27
USP6NL-205ENST00000609104 C9orf16Q9BUW7 83 aa13.35□□□□□ -0.27
USP6NL-205ENST00000609104 THP07101 528 aa13.35□□□□□ -0.27
USP6NL-205ENST00000609104 RHOAP61586 193 aa13.35□□□□□ -0.27
USP6NL-205ENST00000609104 ZNF75CPQ92670 426 aaPredicted RBP13.35□□□□□ -0.27
USP6NL-205ENST00000609104 SH3BGRLO75368 114 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms